FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_SALSV (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Salmonella schwarzengrund (strain CVM19633) GN=astD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22
Identity = 64/153 (41.83%), Postives = 82/153 (53.59%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 459
            GV     P+NFP  L    + PAL  GNT++ K +E TP T   V KL+  AGLP GVLN+V G G   G AL+S  D+D L FTG   TG  +    +    K + LE+GG +P II D A++D AV L   + F   GQ C    R  V +
Sbjct:  136 GVLAVFGPYNFPGHLPNGHIVPALLAGNTLIFKPSELTPWTGETVIKLWERAGLPAGVLNLVQG-GRETGQALSSLDDLDGLLFTGSASTGYQLHRQLSGQPEKILALEMGGNNPLIIEDAANMDAAVHLTLQSAFITAGQRCTCARRLLVKQ 287          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURVG (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=astD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22
Identity = 61/158 (38.61%), Postives = 84/158 (53.16%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 474
            GV     P+NFP  L    + PAL  GNT+V K +E  P  A    +++HEAGLP GVLN+V G   T G ALA+H  +D L FTG  DTG ++ +         + LE+GG +P +I    D+D AV     + F + GQ C    R +V +  + E
Sbjct:  137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEVWHEAGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGAVEDIDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAHGE 293          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL7A1_CAEEL (Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Caenorhabditis elegans GN=alh-9 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22
Identity = 63/168 (37.50%), Postives = 91/168 (54.17%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            GV G I  +NFP  ++ W  A AL  GN++V K A  TPLTA+ V KL  E      + P + ++V G G   G AL     V+ +SFTG  + GKIV +   ++    + LELGG +  I+ +DAD++  V    FA     GQ C    R  VH++VYD+ +E+ +
Sbjct:  176 GVVGVISAFNFPCAVYGWNNALALVTGNSVVWKPAPSTPLTAIAVTKLVEEVLVANNVNPALCSLVCGEG-DVGQALVKDKRVNLVSFTGSSEIGKIVGQ-QVQARFGKLLLELGGNNAIIVNEDADLNMVVPATVFAAVGTAGQRCTTTRRLIVHDKVYDQVLERLK 341          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL221_ARATH (Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22
Identity = 60/164 (36.59%), Postives = 89/164 (54.27%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 480
            GV G IVPWN+P       +  A+  GN IV+K +E    +  +  ++   A    G P  +++V++G+  T  A ++S   VDK+ F G    GK++   AA++ L PVTLELGGK  FII +DADV    ++A      + GQ C    R YVH+ +Y  F+
Sbjct:  190 GVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS---VDKMIFVGSTAVGKMIMRNAAET-LTPVTLELGGKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFI 349          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_VIBF1 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=astD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.558e-22
Identity = 63/154 (40.91%), Postives = 85/154 (55.19%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 459
            GV     P+NFP  L    + PAL  GNT+VLK +EQTP T+  + KL+ ++GLP GV+N+V G   T G ALA+   +D L FTG  +TG I+    A    K + LE+GG +P +I     D+D  V     + F + GQ C    R YV E
Sbjct:  136 GVMAVFGPYNFPGHLPNGHIVPALLAGNTVVLKPSEQTPWTSEVIMKLWQKSGLPKGVINLVQGARAT-GEALANTKGIDGLLFTGSANTGHILHRQFAGDTGKMLALEMGGNNPMVISKAFGDLDATVYTIVQSAFISAGQRCTCARRLYVPE 288          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD1_SHEDO (N-succinylglutamate 5-semialdehyde dehydrogenase 1 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=astD1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.558e-22
Identity = 61/151 (40.40%), Postives = 85/151 (56.29%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV     P+NFP  L    + PAL  GNT++ K +E TP  A    +L+ +AGLP GVLN++ G   T G ALASH  +D L FTG  +TG ++ +  A    K + LE+GG +P II + A+VD AV     + F + GQ C    R ++
Sbjct:  147 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVLFKPSELTPKVAELTMQLWQQAGLPNGVLNLLQGEIAT-GKALASHKGIDGLFFTGSSNTGHLLHQQYAGQPGKILALEMGGNNPLIITEVANVDAAVHDIIQSAFISSGQRCTCARRLFI 296          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA2_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus cereus (strain ZK / E33L) GN=iolA2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.953e-22
Identity = 62/160 (38.75%), Postives = 88/160 (55.00%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 480
            GV G I P+NFP+++  W    A+ CGNT VLK +E+TPL A  +A+L  EAGLP GVLN+V+G        L  H  V  +SF G     + V +   + NLK V    G K+  I+ +DA+++ A +    A F + G+ C A S   V E + D+ V
Sbjct:  147 GVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPLLAARLAELAEEAGLPKGVLNIVNGAHDVVN-GLLEHKLVKAISFVGSQPVAEYVYKKGTE-NLKRVQALAGAKNHSIVLNDANLELATKQIISAAFGSAGERCMAASVVTVEEEIADQLV 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_VIBSL (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=astD PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.953e-22
Identity = 63/152 (41.45%), Postives = 81/152 (53.29%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV     P+NFP  L    + PAL  GNT+V K +EQTP T  +  KL+ EAGLP GV+N+V G   T G ALA    +D + FTG  +TG I+    A    K + LE+GG +P +I D   D D  V     + F + GQ C    R YV
Sbjct:  136 GVMAVFGPYNFPGHLPNGHIVPALLSGNTVVFKPSEQTPWTGEFAMKLWQEAGLPAGVINLVQGAKET-GIALADAKGLDGVLFTGSANTGHILHRQFAGQPGKMLALEMGGNNPMVISDQFGDADATVYTIIQSAFISAGQRCTCARRLYV 286          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_SERP5 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=astD PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.953e-22
Identity = 66/163 (40.49%), Postives = 85/163 (52.15%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE-RVYDEFVEK 486
            GV     P+NFP  L    + PAL  GNT+V K +E TP TA    KL+ +AGLP GV+N+V G G   G ALA+  D+D L FTG   TG  +    A    K + LE+GG +  I+    D D AV LA  + F + GQ C    R  V      D F+E+
Sbjct:  139 GVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPQTAEETLKLWQQAGLPDGVINMVQG-GRETGEALAASTDIDGLLFTGSAGTGYHLHRQLAGQPEKILALEMGGNNALIVDQIEDCDAAVNLAIQSAFISAGQRCTCSRRILVKRGSEGDAFIER 300          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_SALG2 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=astD PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.953e-22
Identity = 64/153 (41.83%), Postives = 81/153 (52.94%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 459
            GV     P+NFP  L    + PAL  GNT++ K +E TP T   V KL+  AGLP GVLN+V G G   G AL+S  D+D L FTG   TG  +    +    K + LE+GG +P II D A+ D AV L   + F   GQ C    R  V +
Sbjct:  136 GVLAVFGPYNFPGHLPNGHIVPALLAGNTLIFKPSELTPWTGETVIKLWERAGLPAGVLNLVQG-GRETGQALSSLDDLDGLLFTGSASTGYQLHRQLSGQPEKILALEMGGNNPLIIEDVANTDAAVHLTLQSAFITAGQRCTCARRLLVKQ 287          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASTD_SALSV3.490e-2241.83N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_BURVG3.490e-2238.61N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
AL7A1_CAEEL3.490e-2237.50Putative aldehyde dehydrogenase family 7 member A1... [more]
AL221_ARATH3.490e-2236.59Aldehyde dehydrogenase 22A1 OS=Arabidopsis thalian... [more]
ASTD_VIBF14.558e-2240.91N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD1_SHEDO4.558e-2240.40N-succinylglutamate 5-semialdehyde dehydrogenase 1... [more]
IOLA2_BACCZ5.953e-2238.75Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ASTD_VIBSL5.953e-2241.45N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SERP55.953e-2240.49N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SALG25.953e-2241.83N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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