FC869243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD1_MYCTU (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium tuberculosis GN=gabD1 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 66/165 (40.00%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG---VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV ++PWNFPL APAL GN +LK A P ALY+A + G P G L V SG A A+ V + TG G+ V +A + +KP LELGG PFI+ AD+D AV A N GQ C A R VH +YD+FV+K Sbjct: 125 GVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSG----AVEAILRDPRVAAATLTGSEPAGQSVGAIAG-NEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDK 284
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD1_MYCTA (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=gabD1 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 66/165 (40.00%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG---VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV ++PWNFPL APAL GN +LK A P ALY+A + G P G L V SG A A+ V + TG G+ V +A + +KP LELGG PFI+ AD+D AV A N GQ C A R VH +YD+FV+K Sbjct: 125 GVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSG----AVEAILRDPRVAAATLTGSEPAGQSVGAIAG-NEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDK 284
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD1_MYCBP (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=gabD1 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 66/165 (40.00%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG---VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV ++PWNFPL APAL GN +LK A P ALY+A + G P G L V SG A A+ V + TG G+ V +A + +KP LELGG PFI+ AD+D AV A N GQ C A R VH +YD+FV+K Sbjct: 125 GVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSG----AVEAILRDPRVAAATLTGSEPAGQSVGAIAG-NEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDK 284
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD1_MYCBO (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium bovis GN=gabD1 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 66/165 (40.00%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG---VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV ++PWNFPL APAL GN +LK A P ALY+A + G P G L V SG A A+ V + TG G+ V +A + +KP LELGG PFI+ AD+D AV A N GQ C A R VH +YD+FV+K Sbjct: 125 GVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSG----AVEAILRDPRVAAATLTGSEPAGQSVGAIAG-NEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDK 284
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_VIBVY (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=astD PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 61/152 (40.13%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRTYV 453 GV P+NFP L + PAL GNT+V K +EQTP T KL+ AGLP GV+N+V G G G ALA +D L FTG +TG ++ A K + LE+GG +P +I D D+D V + F + GQ C R Y+ Sbjct: 136 GVMAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSEQTPWTGELAMKLWQAAGLPQGVINLVQG-GKETGIALAESKGIDGLLFTGSANTGHLLHRQFAGQPGKMLALEMGGNNPMVITDHYGDLDATVYTIIQSAFISAGQRCTCARRLYI 286
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_VIBVU (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio vulnificus GN=astD PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 61/152 (40.13%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRTYV 453 GV P+NFP L + PAL GNT+V K +EQTP T KL+ AGLP GV+N+V G G G ALA +D L FTG +TG ++ A K + LE+GG +P +I D D+D V + F + GQ C R Y+ Sbjct: 136 GVMAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSEQTPWTGELAMKLWQAAGLPQGVINLVQG-GKETGIALAESKGIDGLLFTGSANTGHLLHRQFAGQPGKMLALEMGGNNPMVITDHYGDLDATVYTIIQSAFISAGQRCTCARRLYI 286
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_SHEWM (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=astD PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 63/153 (41.18%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 459 GV P+NFP L + PAL GNT+V K +E TP A + KL+ +AGLP GV+N+V G T G ALASH +D L FTG TG I+ + A K + LE+GG +P II D AV + + + GQ C R YV + Sbjct: 136 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAELMLKLWEKAGLPAGVINLVQGEVET-GKALASHEQIDGLFFTGSSRTGHILHQQYAGEPGKILALEMGGNNPLIIKGVKDTKAAVHDIIQSAYISSGQRCTCARRLYVEK 287
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_SHESA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=astD PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 62/153 (40.52%), Postives = 83/153 (54.25%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 459 GV P+NFP L + PAL GNT+V K +E TP A + L+ +AGLP GV+N+V G T G ALASH +D L FTG TG ++ + A K + LE+GG +P II AD+ AV + + + GQ C R YV + Sbjct: 136 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAELMVSLWEKAGLPAGVINLVQGEVDT-GKALASHPQLDGLFFTGSSRTGHLLHQQYAGHPGKILALEMGGNNPLIIKGVADIKAAVHDILQSAYISSGQRCTCARRLYVEQ 287
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_SHEPW (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=astD PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 63/153 (41.18%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 459 GV P+NFP L + PAL GNT+V K +E TP A + KL+ +AGLP GV+N+V G T G ALASH +D L FTG TG I+ + A K + LE+GG +P II D AV + + + GQ C R YV + Sbjct: 136 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAELMLKLWEKAGLPAGVINLVQGEVET-GKALASHPQIDGLFFTGSSRTGHILHQQYAGDPGKILALEMGGNNPLIIKGVEDTKAAVHDIIQSAYISSGQRCTCARRLYVEK 287
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_SHEPC (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=astD PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 61/153 (39.87%), Postives = 83/153 (54.25%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 459 GV P+NFP L + PAL GNT++ K +E TP A + KL+ +AGLP GV+N+V G T G ALASH +D L FTG TG ++ + A K + LE+GG +P II D+ AV + + + GQ C R YV + Sbjct: 136 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVIFKPSELTPKVAELMVKLWDKAGLPAGVINLVQGEVDT-GKALASHPQIDGLFFTGSSRTGHLLHQQYAGHPGKILALEMGGNNPLIIKGVQDIKAAVHDILQSAYISSGQRCTCARRLYVEQ 287 The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bpback to top |