FC869243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURCA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=astD PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.326e-21 Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEK 486 GV P+NFP L + PAL GNT+V K +E P A +++ EAGLP GVLN+V G T G ALA+H +D L FTG DTG ++ + + LE+GG +P +I + D+D AV + F + GQ C R +V + + D F+ + Sbjct: 137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEVWQEAGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGEVEDIDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAFGDRFLAR 298
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURA4 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=astD PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.326e-21 Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 474 GV P+NFP L + PAL GNT+V K +E P A +++ EAGLP GVLN+V G T G ALA+H +D L FTG DTG ++ + + LE+GG +P +I + D+D AV + F + GQ C R +V + + E Sbjct: 137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEVWQEAGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGEVEDLDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAFGE 293
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA1_BACWK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus weihenstephanensis (strain KBAB4) GN=iolA1 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.732e-21 Identity = 57/161 (35.40%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483 GV I P+NFP+++ W A+ CGNT VLK++E+TPL A + +LF+EAG P GVLN+V G G ++ + D+ +SF G + V E K N K V G K+ ++ D ++++ V+ + F + G+ C A S V + + DEF++ Sbjct: 146 GVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTSERTPLLAERLVELFYEAGFPKGVLNLVQG-GKDVVNSILENKDIQAVSFVGSEPVARYVYETGTK-NGKRVQALAGAKNHAVVMPDCNLEKTVQGVIGSAFASSGERCMACSVVAVVDEIADEFID 304
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GAPN_SCEVA (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Scenedesmus vacuolatus GN=GapN PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.732e-21 Identity = 62/157 (39.49%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 16 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 I P+N+P+ L K+APAL GNT+VLK Q + +++ K F AGLP G +N+V+G G G L +H V+ +SFTG DTG + + K+ + P+ +ELGGK I+ DAD+D A F GQ C A V + + DE V K Sbjct: 3 IPPFNYPVNLAVSKLAPALMAGNTVVLKPPSQGVVAGIHMIKCFQAAGLPAGTVNLVTGKGSEIGDFLTTHPAVNCISFTGG-DTGIAI---SRKAGMVPLQMELGGKDACIVCSDADLDLAATHIIKGGFSYSGQRCTAVKVVLVMQDIADELVRK 155
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_SHESH (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=astD PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.732e-21 Identity = 63/153 (41.18%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 459 GV P+NFP L + PAL GNT+V K +E TP A + KL+ +AGLP GV+N+V G T G ALASH +D L FTG TG I+ + A K + LE+GG +P II D AV + + + GQ C R YV + Sbjct: 136 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAELMLKLWEKAGLPAGVINLVQGEVET-GKALASHPQIDGLFFTGSSRTGHILHQQYAGEPGKILALEMGGNNPLIIKGVKDSKAAVHDIIQSAYISSGQRCTCARRLYVEK 287
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURCM (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=astD PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.732e-21 Identity = 60/158 (37.97%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 474 GV P+NFP L + PAL GNT+V K +E P A +++ EAGLP GVLN+V G T G ALA+H +D L FTG DTG ++ + LE+GG +P +I + D+D AV + F + GQ C R +V + + E Sbjct: 137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEVWQEAGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVIGEVEDLDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAFGE 293
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_ALISL (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=astD PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.732e-21 Identity = 62/152 (40.79%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRTYV 453 GV P+NFP L + PAL GNT+VLK +EQTP T+ + KL+ +AGLP GV+N+V G T G ALAS +D L FTG +TG I+ + K + LE+GG +P +I + + AV + F + GQ C R YV Sbjct: 136 GVMAVFGPYNFPGHLPNGHIVPALLAGNTVVLKPSEQTPWTSEVIMKLWQQAGLPNGVINLVQGARET-GEALASAKGIDGLLFTGSANTGHILHRQFSGDTGKMLALEMGGNNPMVISKSFGEQEAAVYTIIQSAFISAGQRCTCARRLYV 286
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD2_SHEDO (N-succinylglutamate 5-semialdehyde dehydrogenase 2 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=astD2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.732e-21 Identity = 61/153 (39.87%), Postives = 83/153 (54.25%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 459 GV P+NFP L + PAL GNT+V K +E TP A + KL+ +AGLP GV+N+V G T G ALASH +D L FTG TG I+ + A K + LE+GG +P I+ +D AV + + + GQ C R Y+ + Sbjct: 136 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAEEMLKLWDKAGLPKGVINLVQGEVET-GKALASHPQIDGLFFTGSSRTGHILHQQYAGHPGKILALEMGGNNPLIVKGVSDTKAAVHDIIQSAYISSGQRCTCARRLYIEQ 287
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA3_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 3 OS=Bacillus cereus (strain ZK / E33L) GN=iolA3 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.262e-21 Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 480 GV G I P+NFP+++ W A+ CGNT VLK +E+TPL A + +L EAGLP GVLN+V+G L H V +SF G + V + + NLK V G K+ I+ DA+++ A + A F + G+ C A S V E + D+ V Sbjct: 146 GVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPLLAAKLVELAEEAGLPKGVLNIVNGAHDVVN-GLLEHKLVKAISFVGSQPVAEYVYKKGTE-NLKRVQALAGAKNHSIVLSDANLELATKQIISAAFGSAGERCMAASVVTVQEEIADQLV 303
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA2_BACLD (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=iolA2 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.262e-21 Identity = 60/162 (37.04%), Postives = 89/162 (54.94%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV G I P+NFP+++ W A+ GNT +LK +E+TPL + +LF +AGLP GV NVV G L H ++ +SF G G+ V + ++ NLK V G K+ I+ +DA+++ V A F + G+ C A + V E + DEF+EK Sbjct: 144 GVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGIL-EHPEIKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIIGAAFGSAGERCMACAVVTVEEGIADEFMEK 303 The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bpback to top |