FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BURM1 (Betaine aldehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=betB PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.834e-42
Identity = 83/162 (51.23%), Postives = 111/162 (68.52%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN +V K +E TPL+AL +A+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F +K
Sbjct:  144 GVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQK 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL1L2_HUMAN (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 8.834e-42
Identity = 81/162 (50.00%), Postives = 110/162 (67.90%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I+PWN+PL++  WK A  L  GNT+VLK A+ TPLTAL  A+L  +AG P GV+N++ G G  AG  L+ H D+ KL FTG    GK + +  A SNLK V+LELGGKSP IIF+D ++D+AV +   A+F+N+G+ C A  R +V E ++DEFV +
Sbjct:  586 GVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELSVKAGFPKGVINIIPGSGGIAGQRLSEHPDIRKLGFTGSTPIGKQIMKSCAVSNLKKVSLELGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTR 747          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: FTHFD_MOUSE (10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.154e-41
Identity = 76/162 (46.91%), Postives = 114/162 (70.37%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPLTAL  A+L  +AG+P GV+N++ G G   G  L+ H DV K+ FTG  + GK + +  A SN+K V+LELGGKSP IIF D D+++AV++   ++F+N+G+ C A  R +V + ++D+FV+K
Sbjct:  565 GVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDQFVQK 726          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: FTHFD_PONAB (10-formyltetrahydrofolate dehydrogenase OS=Pongo abelii GN=ALDH1L1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.507e-41
Identity = 78/162 (48.15%), Postives = 113/162 (69.75%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I+PWN+PL++ +WK A  L  GNT+V+K A+ TPLTAL  A+L  +AG+P GV+NV+ G G   G  L+ H DV K+ FTG  + GK + +  A SN+K V+LELGGKSP IIF D D+++AV++   ++F+N+G+ C A  R +V + ++DEFV +
Sbjct:  565 GVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDEFVRR 726          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: FTHFD_HUMAN (10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L1 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.507e-41
Identity = 78/162 (48.15%), Postives = 113/162 (69.75%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I+PWN+PL++ +WK A  L  GNT+V+K A+ TPLTAL  A+L  +AG+P GV+NV+ G G   G  L+ H DV K+ FTG  + GK + +  A SN+K V+LELGGKSP IIF D D+++AV++   ++F+N+G+ C A  R +V + ++DEFV +
Sbjct:  565 GVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDEFVRR 726          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.507e-41
Identity = 83/162 (51.23%), Postives = 111/162 (68.52%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTAL +A+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+F+DAD+D+A ++A  A F++ GQ C  G+R +VH  V D F ++
Sbjct:  144 GVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQR 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.507e-41
Identity = 83/162 (51.23%), Postives = 111/162 (68.52%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTAL +A+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+F+DAD+D+A ++A  A F++ GQ C  G+R +VH  V D F ++
Sbjct:  144 GVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQR 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.507e-41
Identity = 80/162 (49.38%), Postives = 108/162 (66.67%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G    I+PWN+PL++  WK A  L  GNT+VLK A+ TPLTAL  A+L  +AG P GV+N++ G G  AG  L+ H D+ KL FTG    GK + +  A SNLK V+LELGGKSP IIF D D+++AV +   A+F+N+G+ C A  R +V E ++DEFV +
Sbjct:  586 GACAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELTVKAGFPKGVINIIPGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMKSCAVSNLKKVSLELGGKSPLIIFSDCDLEKAVRMGMGAVFFNKGENCIAAGRLFVEEAIHDEFVTR 747          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: FTHFD_RAT (10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus GN=Aldh1l1 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 1.968e-41
Identity = 76/162 (46.91%), Postives = 114/162 (70.37%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPLTAL  A+L  +AG+P GV+N++ G G   G  L+ H DV K+ FTG  + GK + +  A SN+K V+LELGGKSP IIF D D+++AV++   ++F+N+G+ C A  R +V E ++++FV+K
Sbjct:  565 GVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQK 726          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH6_YEAST (Magnesium-activated aldehyde dehydrogenase, cytosolic OS=Saccharomyces cerevisiae GN=ALD6 PE=1 SV=4)

HSP 1 Score: 168.703 bits (426), Expect = 1.968e-41
Identity = 80/160 (50.00%), Postives = 108/160 (67.50%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 480
            GV GQI+PWNFP+++  WK+APAL  GN  +LK A  TPL ALY A L  + G+P GV+N+V G G T GAAL +   + KL+FTG  + GK V   +++SNLK +TLELGGKS  ++FDDA++ + +      +F N GQ C +GSR YV E +YDE +
Sbjct:  164 GVCGQIIPWNFPIMMLAWKIAPALAMGNVCILKPAAVTPLNALYFASLCKKVGIPAGVVNIVPGPGRTVGAALTNDPRIRKLAFTGSTEVGKSVAVDSSESNLKKITLELGGKSAHLVFDDANIKKTLPNLVNGIFKNAGQICSSGSRIYVQEGIYDELL 323          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_BURM18.834e-4251.23Betaine aldehyde dehydrogenase OS=Burkholderia mul... [more]
AL1L2_HUMAN8.834e-4250.00Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
FTHFD_MOUSE1.154e-4146.9110-formyltetrahydrofolate dehydrogenase OS=Mus mus... [more]
FTHFD_PONAB1.507e-4148.1510-formyltetrahydrofolate dehydrogenase OS=Pongo a... [more]
FTHFD_HUMAN1.507e-4148.1510-formyltetrahydrofolate dehydrogenase OS=Homo sa... [more]
BETB_BURCM1.507e-4151.23Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURA41.507e-4151.23Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
AL1L2_MOUSE1.507e-4149.38Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
FTHFD_RAT1.968e-4146.9110-formyltetrahydrofolate dehydrogenase OS=Rattus ... [more]
ALDH6_YEAST1.968e-4150.00Magnesium-activated aldehyde dehydrogenase, cytoso... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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