FC869263

Overview
NameFC869263
Unique NameFC869263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_BUXMI (ATP-dependent Clp protease proteolytic subunit OS=Buxus microphylla GN=clpP PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.000e-33
Identity = 69/147 (46.94%), Postives = 95/147 (64.63%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADEL 660
            MPIG PKV +R PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   DD+K +Y++IN PGG V P +AIYDTMQ +   + T C+G A  +  FLL GGE   R A P +R+ +  PA +    Q  +   EA+EL
Sbjct:    1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVPPDIHTICMGLAASMGSFLLVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEEL 147          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_VITVI (ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=clpP PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.143e-33
Identity = 68/147 (46.26%), Postives = 94/147 (63.95%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADEL 660
            MPIG PKV +R PGE    W+D++N LYRER++F+GQ ++ E SNQ++  M+YL   D++K +Y +IN PGG V P +AIYDTMQ +   V T C+G A  +  F+L GG    R A P +R+ +  PA A    QA +   EA+EL
Sbjct:    1 MPIGVPKVPFRNPGEDDISWIDVYNRLYRERLLFLGQEVESEISNQLIGLMIYLSIEDENKDLYFFINSPGGWVLPGIAIYDTMQFVPPEVHTICLGLAASMGSFILVGGTITKRLAFPHARVMIHQPAAAFYEAQAGEFVMEAEEL 147          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_MARPO (ATP-dependent Clp protease proteolytic subunit OS=Marchantia polymorpha GN=clpP PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.143e-33
Identity = 66/147 (44.90%), Postives = 98/147 (66.67%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADEL 660
            MPIG PKV +R PGE    W+D++N LYRER++F+GQ +D+E +NQ++  M+YL+  D+SK +Y+YIN PGG V   +++YD MQ +   V T C+G A  +  F+L GGE   R A+P +R+ +  PA +   GQA +   EA+E+
Sbjct:    1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDESKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARVMIHQPASSYYDGQAGECIMEAEEV 147          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_AETGR (ATP-dependent Clp protease proteolytic subunit OS=Aethionema grandiflora GN=clpP PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.143e-33
Identity = 68/147 (46.26%), Postives = 96/147 (65.31%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADEL 660
            MPIG PKV +R+PGEG   WVD++N LYRER+ F+GQ +D + SNQ+++ M+YL    D+K +Y++IN PGG V   +AIYDTMQ ++  V T C+G A  +A F+L GG    R A P +R+ +  PA +    Q  +   EA+EL
Sbjct:    1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTDISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEEL 147          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_AETCO (ATP-dependent Clp protease proteolytic subunit OS=Aethionema cordifolium GN=clpP PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.143e-33
Identity = 68/147 (46.26%), Postives = 96/147 (65.31%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADEL 660
            MPIG PKV +R+PGEG   WVD++N LYRER+ F+GQ +D + SNQ+++ M+YL    D+K +Y++IN PGG V   +AIYDTMQ ++  V T C+G A  +A F+L GG    R A P +R+ +  PA +    Q  +   EA+EL
Sbjct:    1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTDISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEEL 147          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=clpP PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.560e-32
Identity = 68/147 (46.26%), Postives = 96/147 (65.31%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADEL 660
            MPIG PKV +R PGE S  W+D++N LYRER++F+GQ+ID E SNQ++  M+YL +  + K +Y++IN PGG V P +AIYDTMQ ++  V T C+G A  +  F+L GG+   R A P +R+ +  P A     Q  +   EA+EL
Sbjct:    1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHARVMIHQPFAAFYEAQIGEFVLEAEEL 147          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_POPAL (ATP-dependent Clp protease proteolytic subunit OS=Populus alba GN=clpP PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.560e-32
Identity = 68/147 (46.26%), Postives = 96/147 (65.31%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADEL 660
            MPIG PKV +R PGE S  W+D++N LYRER++F+GQ+ID E SNQ++  M+YL +  + K +Y++IN PGG V P +AIYDTMQ ++  V T C+G A  +  F+L GG+   R A P +R+ +  P A     Q  +   EA+EL
Sbjct:    1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHARVMIHQPFAAFYEAQIGEFVLEAEEL 147          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_CHLAT (ATP-dependent Clp protease proteolytic subunit OS=Chlorokybus atmophyticus GN=clpP PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.560e-32
Identity = 64/146 (43.84%), Postives = 96/146 (65.75%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660
            MPIG PKV YR PGE    +VD++N LYRER++F+G+++D+E +NQ++  M++L+S DD+K ++ YIN PGG +   L +YD +Q +   V T C+G A  +A F+LAGG  G R   P +R+ L  P G   G+A  +  E+ E+
Sbjct:    1 MPIGIPKVAYRIPGESVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIFFYINSPGGSMNSGLGVYDMIQHINVDVTTICMGLAASMASFILAGGTPGQRLMFPHARVMLHQPMGGNGGKAKYMVEESVEV 146          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_SOLTU (ATP-dependent Clp protease proteolytic subunit OS=Solanum tuberosum GN=clpP PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.037e-32
Identity = 66/147 (44.90%), Postives = 95/147 (64.63%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADEL 660
            MPIG PKVL+R PG+    WVD++N LYRER++F+GQ I  + SNQ++  M+YL   D++K +Y+++N PGG V P +AIYDTMQ ++  + T C+G A  +  F+LAGG+   R A P +R+ +  P  A    Q  +   EA EL
Sbjct:    1 MPIGVPKVLFRNPGDPISSWVDVYNRLYRERLLFLGQGISTDLSNQLIGLMMYLSMEDENKELYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICIGLAASMGSFILAGGQLTKRIAFPHARVMIHEPYSAFYMAQVGEFVMEAVEL 147          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_SOLBU (ATP-dependent Clp protease proteolytic subunit OS=Solanum bulbocastanum GN=clpP PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.037e-32
Identity = 66/147 (44.90%), Postives = 95/147 (64.63%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADEL 660
            MPIG PKVL+R PG+    WVD++N LYRER++F+GQ I  + SNQ++  M+YL   D++K +Y+++N PGG V P +AIYDTMQ ++  + T C+G A  +  F+LAGG+   R A P +R+ +  P  A    Q  +   EA EL
Sbjct:    1 MPIGVPKVLFRNPGDPISSWVDVYNRLYRERLLFLGQGISTDLSNQLIGLMMYLSMEDENKELYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICIGLAASMGSFILAGGQLTKRIAFPHARVMIHEPYSAFYMAQVGEFVMEAVEL 147          
The following BLAST results are available for this feature:
BLAST of FC869263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_BUXMI7.000e-3346.94ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_VITVI9.143e-3346.26ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_MARPO9.143e-3344.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AETGR9.143e-3346.26ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AETCO9.143e-3346.26ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_POPTR1.560e-3246.26ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_POPAL1.560e-3246.26ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CHLAT1.560e-3243.84ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SOLTU2.037e-3244.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SOLBU2.037e-3244.90ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionC31010C10EF AbioticL1 Citrus clementina cDNA clone C31010C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869263 ID=FC869263; Name=FC869263; organism=Citrus clementina; type=EST; length=662bp
CGGGGACTCTCTCGCGCTAACATGTCCGTTTCTCTTAACGCAAACTTATA
TCAACCTTCTCTGAGCTGTAACCTCAAGCTTTATTCTGGATTAAAGATTC
AATCACCAAGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCTGAATTC
TATGGCAGAGTTCATAAGAGCCTCTACTCCGGGATTCGTAATGATAAACC
AATAAGGGGACGAATTGCAATGATGCCAATTGGGACACCAAAAGTGCTTT
ATAGGACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGGAATGCC
CTATATCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGAAGAATT
TAGCAACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTGATGATT
CCAAAAGGGTTTATATGTACATCAACGGTCCTGGTGGGGATGTTACTCCC
ACCTTGGCAATTTACGACACTATGCAGAGCTTGAAGAGTCCTGTTGGCAC
TCACTGTGTGGGCTTTGCCTATCATTTAGCAGGGTTTCTTCTAGCAGGTG
GAGAAAAGGGTAATCGGTCTGCAATGCCTCTTTCGAGAATTGCTTTAGAC
TCTCCGGCTGGTGCAGCTCGCGGTCAGGCTGATGACATTCGTAATGAAGC
AGATGAGCTTCT
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