FC869268

Overview
NameFC869268
Unique NameFC869268
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_HAEIN (Phosphoglycerate kinase OS=Haemophilus influenzae GN=pgk PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 2 
Query:  305 SVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK--GVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPEL 691
            SV +++  DL GK+VF+RADLNVP+ D + +T D RIRA +PT+K  ++ GAKV+++SHLGRP      P+ SL P+V  L    G  V    D +          + +G +++LENVR  K E+K  PEL
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDGK-VTSDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLKN-AGFNVRLEQDYLNG------VDVKDGEIVVLENVRVNKGEKKNDPEL 124
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_HAEIG (Phosphoglycerate kinase OS=Haemophilus influenzae (strain PittGG) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 2 
Query:  305 SVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK--GVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPEL 691
            SV +++  DL GK+VF+RADLNVP+ D + +T D RIRA +PT+K  ++ GAKV+++SHLGRP      P+ SL P+V  L    G  V    D +          + +G +++LENVR  K E+K  PEL
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDGK-VTSDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLKN-AGFNVRLEQDYLNG------VDVKDGEIVVLENVRVNKGEKKNDPEL 124
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_HAEIE (Phosphoglycerate kinase OS=Haemophilus influenzae (strain PittEE) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 2 
Query:  305 SVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK--GVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPEL 691
            SV +++  DL GK+VF+RADLNVP+ D + +T D RIRA +PT+K  ++ GAKV+++SHLGRP      P+ SL P+V  L    G  V    D +          + +G +++LENVR  K E+K  PEL
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDGK-VTSDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLKN-AGFNVRLEQDYLNG------VDVKDGEIVVLENVRVNKGEKKNDPEL 124
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ENT38 (Phosphoglycerate kinase OS=Enterobacter sp. (strain 638) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 59/128 (46.09%), Postives = 85/128 (66.41%), Query Frame = 2 
Query:  305 SVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK--GVTPKFSLAPLVPRLSELLG--IQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            SV +++  DL GK+VF+RADLNVP+ D + +T D RIRA++PTI+  ++ GAKV+++SHLGRP       +FSL P+V  L + L   +++VK D   G EV        EG +++LENVRF K E+K
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDGK-VTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVK-DYLDGVEV-------AEGELVVLENVRFNKGEKK 120
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_DESDA (Phosphoglycerate kinase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 61/130 (46.92%), Postives = 76/130 (58.46%), Query Frame = 2 
Query:  308 VGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK--GVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPEL 691
            V ++   DL GK V +R DLNVP+ D   IT+D RIRAA+PTI+  ++ GA VI+ SHLGRP       +FSLAP+  RL++LLG  V  A            A    G V LLENVRF   E+K  PEL
Sbjct:    3 VTKMQDLDLGGKTVVIREDLNVPMKDGI-ITNDKRIRAALPTIQLALEKGAGVIVLSHLGRPTEGQYDQQFSLAPVADRLAQLLGQPVTLAKSLD-------EAKTAPGQVTLLENVRFLPGEKKNDPEL 124
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ACIBY (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain AYE) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 2 
Query:  317 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPK--FSLAPLVPRLSELLGIQVVKADDCI-GPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            ++  +L GK+V +R DLNVP+  N  IT D R+RAA+PTIK  ++ GA V++ SHLGRP    PK   SLAP+   L+E LG +V    D + G EVE        G V+LLENVRF   E+K  PEL +
Sbjct:    6 MTDLNLAGKRVLIREDLNVPVK-NGVITSDARLRAALPTIKAALEKGAAVMVFSHLGRPVEGEPKPEQSLAPVAAYLTEALGQEVKLFTDYLDGVEVE-------AGQVVLLENVRFNPGEKKNNPELAQ 127
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ACIBS (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain SDF) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 2 
Query:  317 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPK--FSLAPLVPRLSELLGIQVVKADDCI-GPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            ++  +L GK+V +R DLNVP+  N  IT D R+RAA+PTIK  ++ GA V++ SHLGRP    PK   SLAP+   L+E LG +V    D + G EVE        G V+LLENVRF   E+K  PEL +
Sbjct:    6 MTDLNLAGKRVLIREDLNVPVK-NGVITSDARLRAALPTIKAALEKGAAVMVFSHLGRPVEGEPKPEQSLAPVAAYLTEALGQEVKLFTDYLDGVEVE-------AGQVVLLENVRFNPGEKKNNPELAQ 127
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ACIBC (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain ACICU) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 2 
Query:  317 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPK--FSLAPLVPRLSELLGIQVVKADDCI-GPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            ++  +L GK+V +R DLNVP+  N  IT D R+RAA+PTIK  ++ GA V++ SHLGRP    PK   SLAP+   L+E LG +V    D + G EVE        G V+LLENVRF   E+K  PEL +
Sbjct:    6 MTDLNLAGKRVLIREDLNVPVK-NGVITSDARLRAALPTIKAALEKGAAVMVFSHLGRPVEGEPKPEQSLAPVAAYLTEALGQEVKLFTDYLNGVEVE-------AGQVVLLENVRFNPGEKKNNPELAQ 127
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ACIB5 (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain AB0057) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 2 
Query:  317 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPK--FSLAPLVPRLSELLGIQVVKADDCI-GPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            ++  +L GK+V +R DLNVP+  N  IT D R+RAA+PTIK  ++ GA V++ SHLGRP    PK   SLAP+   L+E LG +V    D + G EVE        G V+LLENVRF   E+K  PEL +
Sbjct:    6 MTDLNLAGKRVLIREDLNVPVK-NGVITSDARLRAALPTIKAALEKGAAVMVFSHLGRPVEGEPKPEQSLAPVAAYLTEALGQEVKLFTDYLDGVEVE-------AGQVVLLENVRFNPGEKKNNPELAQ 127
[Close]
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ACIB3 (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain AB307-0294) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 2 
Query:  317 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPK--FSLAPLVPRLSELLGIQVVKADDCI-GPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            ++  +L GK+V +R DLNVP+  N  IT D R+RAA+PTIK  ++ GA V++ SHLGRP    PK   SLAP+   L+E LG +V    D + G EVE        G V+LLENVRF   E+K  PEL +
Sbjct:    6 MTDLNLAGKRVLIREDLNVPVK-NGVITSDARLRAALPTIKAALEKGAAVMVFSHLGRPVEGEPKPEQSLAPVAAYLTEALGQEVKLFTDYLDGVEVE-------AGQVVLLENVRFNPGEKKNNPELAQ 127
The following BLAST results are available for this feature:
BLAST of FC869268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_HAEIN4.182e-1842.75Phosphoglycerate kinase OS=Haemophilus influenzae ... [more]
PGK_HAEIG4.182e-1842.75Phosphoglycerate kinase OS=Haemophilus influenzae ... [more]
PGK_HAEIE4.182e-1842.75Phosphoglycerate kinase OS=Haemophilus influenzae ... [more]
PGK_ENT384.182e-1846.09Phosphoglycerate kinase OS=Enterobacter sp. (strai... [more]
PGK_DESDA4.182e-1846.92Phosphoglycerate kinase OS=Desulfovibrio desulfuri... [more]
PGK_ACIBY4.182e-1846.92Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIBS4.182e-1846.92Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIBC4.182e-1846.92Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIB54.182e-1846.92Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIB34.182e-1846.92Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]

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Properties
Property NameValue
Genbank descriptionC31010D04EF AbioticL1 Citrus clementina cDNA clone C31010D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869268 ID=FC869268; Name=FC869268; organism=Citrus clementina; type=EST; length=702bp
GAAAACCACTTCCCATTTCCCCACTTTGTCGACAAAGTTTCAATCTTTTG
CGCCTTTACTACGCCCCTCCACTCCCGCCACATCAATGGCTTCAGCCACC
GCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTC
TTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGC
TGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGG
CTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAA
GAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGT
TTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACT
GATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCA
AAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTG
TTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTC
CTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGTAGA
AAAGCTTGTAGCCTCACTTCCTGAAGGCGGTGTTCTTCTTCTTGAAAACG
TGAGGTTCTACAAAGAGGAGGAAAAAACGATCCCTGAGTTGCAAGAAAGC
TG
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