FC869281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18 Identity = 44/82 (53.66%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 415 PPQSEVTHRK----KFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPVLTGDDVV 648 P + TH ++RGVR+RPWGR+AAEIRDP ++ R+WLGTFDT EEAA YD AA +GA A TNFP + D V Sbjct: 10 PATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSDQKV 91
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18 Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 403 AHQPPPQSEVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618 A +P P +T +K +RGVR+R WG+W AEIR P R RLWLGTFDT EEAA YD AA KL+G A NFP Sbjct: 78 APKPVPMKNMTAQKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17 Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 442 KKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPVLT 633 KK+RGVR+RPWG+WAAEIRDP++ R+WLGTF+T E AA YD AA++ +G+ A NFP V T Sbjct: 59 KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGT 122
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17 Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 1 Query: 421 QSEVTHRKKFRGVRRRPWGRWAAEIRDPNRR-KRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPN 621 QS+ + +FRGVRRRPWG++AAEIRDP+R RLWLGTF+T EEAA YD+AA L+G A+ NFPN Sbjct: 11 QSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPN 78
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.622e-17 Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 448 FRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNP 624 +RGVR+RPWGR+AAEIRDP ++ R+WLGTFDT EEAA YD AA + +G A TNFP P Sbjct: 27 YRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPLP 85
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.614e-17 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 1 Query: 418 PQSEVTHRKKFRGVRRRPWGRWAAEIRDPNRR-KRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618 P SE +K +RGVR+RPWG++AAEIRDPN+R R+WLGTFDT EAA YD+AA +L+G+ A+ NFP Sbjct: 147 PVSE-EEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFP 213
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.720e-17 Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 430 VTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618 + H KKFRGVR+R WG W +EIR P ++R+WLGTFDT E AA YDQAAV + G +A TNFP Sbjct: 1 MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFP 63
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.164e-17 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 442 KKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618 KKFRGVR+R WG W AEIR P ++R+WLGTF+T EEAA YD+AAV + G NA TNFP Sbjct: 5 KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFP 63
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.164e-17 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 448 FRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPN 621 +RG+R+RPWG+WAAEIRDP++ R+WLGTF T +EAA YD AA+K++G A NFPN Sbjct: 50 YRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPN 107
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.164e-17 Identity = 37/63 (58.73%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 439 RKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPV 627 R+++RGVR+RPWG+WAAEIRDP + R+WLGTFD E AA YD+AA++ +G A NFP V Sbjct: 182 RRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENV 244 The following BLAST results are available for this feature:
BLAST of FC869281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869281 ID=FC869281; Name=FC869281; organism=Citrus clementina; type=EST; length=711bpback to top |