FC869281

Overview
NameFC869281
Unique NameFC869281
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.163e-15
Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = 1
Query:  415 PPQSEVTHRKK---------FRGVRRRPWGRWAAEIRDPNRR-KRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPVLTGDDVVNGQRQR 666
            P    V++RKK         +RGVRRRPWG++AAEIRDP ++  R+WLGTF++  +AA  YD AA KL+G  AV NFP      D  VN  R+R
Sbjct:   87 PEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKR 180          
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 1
Query:  412 PPPQSEVTHRKKFRGVRRRPWGRWAAEIRDPNRR-KRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618
            P P      ++ +RGVR RPWG++AAEIRDP RR  R+WLGTF+T  EAA  YD+ A +L+G+ A+ NFP
Sbjct:  125 PVPVVAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFP 194          
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 36/60 (60.00%), Postives = 50/60 (83.33%), Query Frame = 1
Query:  445 KFRGVRRRPWGRWAAEIRDPNRR-KRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPN 621
            ++RGVRRRPWG++AAEIRDP +   R+WLGT++TPE+AA  YD+AA +L+G+ A  NFP+
Sbjct:   91 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPH 150          
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 1
Query:  421 QSEVTHRKKFRGVRRRPWGRWAAEIRDPNRR-KRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPVLTGDDVVNGQRQ 663
            +S  T+  K+RGVR+RPWG++AAEIRD  R   R+WLGTF+T E+AA  YD+AA  ++G  A+ NFP+      D  NG  +
Sbjct:    5 ESYNTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHEYQMMKDGPNGSHE 86          
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  445 KFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618
            ++RGVR+RPWGR+AAEIRDP ++ R+WLGTFD+  +AA  YD AA  L+G  A TNFP
Sbjct:   26 RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFP 83          
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1
Query:  421 QSEVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNF 615
            +S      ++RGVR+RPWGR+AAEIRDP ++ R+WLGTFDT ++AA  YD AA   +G  A TNF
Sbjct:   22 ESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86          
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF70_ARATH (Ethylene-responsive transcription factor ERF070 OS=Arabidopsis thaliana GN=ERF070 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 41/72 (56.94%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  442 KKFRGVRRRPWGRWAAEIRD-----PNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPVLTGDD 642
            KK+RGVR+RPWG+W AEIR        RR RLWLGTF+T EEAA  YD A++KL G +A TNF  P    +D
Sbjct:   77 KKYRGVRQRPWGKWVAEIRCGRGACKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPTNFGLPAENQED 148          
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 1
Query:  421 QSEVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618
            Q  V+ +  FRGVR R WG+W +EIR+P ++ R+WLGTF TPE AA  +D AA+ +KG +A  NFP
Sbjct:   31 QKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFP 96          
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query:  427 EVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPN--PVLTGDDV 645
            ++   + F+G+R R WG+W AEIR+PN+R RLWLG++ TPE AA  YD A   L+G  A  NFP   P  + +D+
Sbjct:   14 KMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELLPCTSAEDM 88          
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  448 FRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618
            +RGVR+RPWG++AAEIRDP R  R+WLGTF+T E+AA  YD+AA+  +G  A  NFP
Sbjct:  136 YRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192          
The following BLAST results are available for this feature:
BLAST of FC869281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
EF107_ARATH1.163e-1548.94Ethylene-responsive transcription factor ERF107 OS... [more]
EF103_ARATH1.518e-1554.29Ethylene-responsive transcription factor 6 OS=Arab... [more]
ERF99_ARATH1.983e-1560.00Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF95_ARATH1.983e-1548.78Ethylene-responsive transcription factor ERF095 OS... [more]
ERF83_ARATH1.983e-1562.07Ethylene-responsive transcription factor 7 OS=Arab... [more]
ERF79_ARATH2.590e-1555.38Ethylene-responsive transcription factor 8 OS=Arab... [more]
ERF70_ARATH2.590e-1556.94Ethylene-responsive transcription factor ERF070 OS... [more]
ERF39_ARATH2.590e-1553.03Ethylene-responsive transcription factor ERF039 OS... [more]
ERF11_ARATH2.590e-1546.67Ethylene-responsive transcription factor ERF011 OS... [more]
EF109_ARATH2.590e-1561.40Ethylene-responsive transcription factor ERF109 OS... [more]

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Properties
Property NameValue
Genbank descriptionC31010E06EF AbioticL1 Citrus clementina cDNA clone C31010E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869281 ID=FC869281; Name=FC869281; organism=Citrus clementina; type=EST; length=711bp
GGACTCCTCCCAATTTCAGTTCGCAGTTCTCTCTAGCTCTTTAATTTCTA
TTCCTTGATCACTTGCTCTCAAATCTCTTTCCCGCCAAAATCTGCTGCGG
TTTTGGCCTTGTTCATGTCTCCAAAATCCGACATGATCATCAAGTTCACT
GAACACGTGGTCACTACCGATAAGCCCATAATCAGTACTCCAGCACCTCA
AAAACTTGTTCGAATCATACTTACCGACGCTGACGCCACCGATTCTTCCA
GCGATGATGAACAAGTAATTAACCACGTTCGAAGAGTCAAACGACATGTC
AAACAAATCAACCTTAATAATCATCATCGACGACGACACCAACAGCAGCA
ACGAGGACAACAGAGCAATAAGCTTCAGCATAATAAGAAGATAAAGAGAC
ATGCGCACCAACCGCCGCCGCAAAGTGAAGTCACTCACCGGAAAAAGTTC
CGGGGAGTCCGCCGGAGACCATGGGGAAGATGGGCCGCCGAGATCCGAGA
CCCCAATCGGAGGAAACGCCTCTGGCTTGGCACTTTTGACACTCCTGAAG
AAGCTGCCTCTGTTTATGATCAAGCTGCTGTCAAGCTTAAAGGCGCTAAC
GCCGTTACAAACTTCCCCAACCCCGTTTTAACGGGAGATGATGTCGTTAA
CGGTCAACGTCAACGGACAGGCGTTGATTCGTTTGACTCCTCTGACATTA
GCTCTCTGTCG
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