FC870530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.495e-28 Identity = 59/86 (68.60%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 261 TVRL A+YDEIKA + S+G +KGIL YTE++VVSTDFVGD+ SS+FDAKAGI L+ KFVKL+SWYDNE+GYS RV+DLI +M Sbjct: 243 TVRLGKSATYDEIKAKVLEASQGPMKGILDYTEEEVVSTDFVGDTHSSVFDAKAGIPLNDKFVKLISWYDNEFGYSNRVIDLIKYM 328
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28 Identity = 59/87 (67.82%), Postives = 76/87 (87.36%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 264 TV+L A+YDEIKAA+K +EG LKG++GYTED VVS+DF+ D+RSSIFDA+AGI LS +FVKL++WYDNE+GYSTRVVDL+ ++A Sbjct: 245 TVKLLKDATYDEIKAAVKEAAEGPLKGVVGYTEDQVVSSDFLTDNRSSIFDAEAGIWLSPRFVKLIAWYDNEYGYSTRVVDLLEYVA 331
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P2_DROPS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila pseudoobscura pseudoobscura GN=Gapdh2 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28 Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 261 TVRL ASYDEIKA ++ + G LKGILGYT+++VVSTDF+ D+ SS+FDAKAGI+L+ KFVKL+SWYDNE+GYS RV+DLI +M Sbjct: 243 TVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLIKYM 328
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P2_DROME (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila melanogaster GN=Gapdh2 PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28 Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 261 TVRL ASYDEIKA ++ + G LKGILGYT+++VVSTDF+ D+ SS+FDAKAGI+L+ KFVKL+SWYDNE+GYS RV+DLI +M Sbjct: 243 TVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLIKYM 328
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P_COLLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Columba livia GN=GAPDH PE=2 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 9.373e-28 Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 273 T RL+ A YD+IK +KA ++G LKGIL YTED VVS DF GDS SS FDA AGIAL+ FVKLVSWYDNE+GYS RVVDL+VHMA + Sbjct: 244 TCRLEKPAKYDDIKRVVKAAADGPLKGILAYTEDQVVSCDFNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEYGYSNRVVDLMVHMASKE 333
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P1_DROME (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Drosophila melanogaster GN=Gapdh1 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.373e-28 Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 261 TVRL A+YDEIKA ++ S+G LKGILGYT+++VVSTDF D+ SS+FDAKAGI+L+ KFVKL+SWYDNE+GYS RV+DLI +M Sbjct: 243 TVRLGKGATYDEIKAKVEEASKGPLKGILGYTDEEVVSTDFFSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLIKYM 328
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 61/90 (67.78%), Postives = 69/90 (76.67%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 273 T RL+ A YDEIK +K SEG LKGILGYTED VVS DF D+ SS FDA AGIAL+ FVKL+SWYDNE+GYS RVVDL+VHMA + Sbjct: 233 TCRLEKPAKYDEIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE 322
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Bos taurus GN=GAPDH PE=1 SV=4) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 61/90 (67.78%), Postives = 69/90 (76.67%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 273 T RL+ A YDEIK +K SEG LKGILGYTED VVS DF D+ SS FDA AGIAL+ FVKL+SWYDNE+GYS RVVDL+VHMA + Sbjct: 244 TCRLEKPAKYDEIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE 333
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 60/88 (68.18%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 267 TV+L A+Y+EIKA +K SE +LKG++GYTED VVS+DF+GD+ SSIFDA AGI LS +FVKLVSWYDNE+GYSTRVVDL+ +AK Sbjct: 243 TVKLAKPATYEEIKAVVKKASENELKGVMGYTEDAVVSSDFLGDTHSSIFDAAAGIQLSPQFVKLVSWYDNEFGYSTRVVDLVELVAK 330
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 57/88 (64.77%), Postives = 72/88 (81.82%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 267 TVR++ ASY+EI IK ++G LKG+L YT DDVVS+D +G++ SSIFD KAGI+L+K FVKLVSWYDNEWGYS RV+DL+ H+AK Sbjct: 246 TVRIEKGASYEEITETIKKAADGPLKGVLAYTGDDVVSSDMLGNTNSSIFDIKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLAHVAK 333 The following BLAST results are available for this feature:
BLAST of FC870530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 228
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870530 ID=FC870530; Name=FC870530; organism=Citrus clementina; type=EST; length=593bpback to top |