FC870700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF3_TAKRU (ADP-ribosylation factor 3 OS=Takifugu rubripes GN=arf3 PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.961e-22 Identity = 54/170 (31.76%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 88 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 F N L+SL K+EM + ++GL AGKT+++ + G IPT+GFN+ V +++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DWL Sbjct: 5 FGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF3_RAT (ADP-ribosylation factor 3 OS=Rattus norvegicus GN=Arf3 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.961e-22 Identity = 54/170 (31.76%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 88 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 F N L+SL K+EM + ++GL AGKT+++ + G IPT+GFN+ V +++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DWL Sbjct: 5 FGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF3_PONAB (ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 3.961e-22 Identity = 54/170 (31.76%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 88 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 F N L+SL K+EM + ++GL AGKT+++ + G IPT+GFN+ V +++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DWL Sbjct: 5 FGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.961e-22 Identity = 54/170 (31.76%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 88 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 F N L+SL K+EM + ++GL AGKT+++ + G IPT+GFN+ V +++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DWL Sbjct: 5 FGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.961e-22 Identity = 54/170 (31.76%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 88 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 F N L+SL K+EM + ++GL AGKT+++ + G IPT+GFN+ V +++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DWL Sbjct: 5 FGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 3.961e-22 Identity = 54/170 (31.76%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 88 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 F N L+SL K+EM + ++GL AGKT+++ + G IPT+GFN+ V +++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DWL Sbjct: 5 FGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF2_YEAST (ADP-ribosylation factor 2 OS=Saccharomyces cerevisiae GN=ARF2 PE=1 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 3.961e-22 Identity = 56/176 (31.82%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 MGL+ + L +LF +EM + ++GL AGKT+++ + G IPT+GFN+ V +++ +WD+GGQ R RS+W Y R +++V+D+ D + +R + +L++ L LV NK D PEA+S ++ E++GL SI +R + + ++WL Sbjct: 1 MGLYASKL--FSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVIDSNDRSRIGEAREVMQRMLNEDELRNAVWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQSTCATSGEGLYEGLEWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 5.173e-22 Identity = 53/166 (31.93%), Postives = 91/166 (54.82%), Query Frame = 1 Query: 100 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 L LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V +++ +WD+GGQ + R +W Y + I++VVD+ D + + +R EL +LS+ L LLV NK D P A++ ++ +++GL S+ R + + ++WL Sbjct: 9 LNGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRQRSWYIQAACATSGDGLYEGLEWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF_AJECA (ADP-ribosylation factor OS=Ajellomyces capsulata GN=ARF PE=1 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 5.173e-22 Identity = 55/171 (32.16%), Postives = 92/171 (53.80%), Query Frame = 1 Query: 85 AFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 AF ++ K+EM + ++GL AGKT+++ + G IPT+GFN+ V ++ +WD+GGQ + R +W Y + I++VVD+ D D + +R EL +L++ L LLV NK D P A+S ++ +Q+GL+S+T R + ++WL Sbjct: 4 AFSKLFDRIWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTRRAWYIQSTCATTGDGLYEGLEWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF6_XENLA (ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf6 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22 Identity = 50/141 (35.46%), Postives = 81/141 (57.45%), Query Frame = 1 Query: 109 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 531 +F +EM + + GL AGKT+++ + G S IPTVGFN+ VT +V +WD+GGQ + R +W Y +++VVD D D + +R ELH +++ + +L+ NK D P+A+ ++ E++GL I DR Sbjct: 8 IFGNKEMRILMRGLDAAGKTTILYKLKLG-QSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCPDRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDR 147 The following BLAST results are available for this feature:
BLAST of FC870700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870700 ID=FC870700; Name=FC870700; organism=Citrus clementina; type=EST; length=866bpback to top |