FC870700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.757e-21 Identity = 51/159 (32.08%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 121 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 QE+ + L+GL NAGKT+L+ +A+ S + PT GFN++ V + +WD+GGQ + R W Y ++YV+D+AD + EL +LL + L+G+P+L+ NK D A ++ E + L +I DR S + + ++W+ Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALSGEGVQDGMNWV 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.274e-20 Identity = 54/172 (31.40%), Postives = 96/172 (55.81%), Query Frame = 1 Query: 85 AFLNWLRSLFF-KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 +F + + SLF K+E + +IGL AGK++L+ + G IPT+GFN+ + ++++ +WD+GGQ + R +W+ Y +A+++VVD+ D + + + E+ +LL + L G +LV NK D A++ +++ + L SI DR+ S S I DW+ Sbjct: 11 SFFSNIFSLFEGKKETRILMIGLDGAGKSTLLYKLKLGDVVST-IPTIGFNVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDWV 181
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.274e-20 Identity = 50/163 (30.67%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 109 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 +F K++M + ++GL AGKT+++ + G IPT+GFN+ V ++ +WD+GGQ + R +W Y + +++VVD+ D + + S EL +L + L LLV NK D P A+ +L +++GL+++ R T + +DWL Sbjct: 12 IFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVSELTDKLGLQALRSRTWYVQATCATQGTGLYDGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFA (ADP-ribosylation factor 1 OS=Plasmodium falciparum GN=ARF1 PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.274e-20 Identity = 53/176 (30.11%), Postives = 94/176 (53.41%), Query Frame = 1 Query: 70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 MGL+ + L LF K+++ + ++GL AGKT+++ + G IPT+GFN+ V +++ +WD+GGQ + R +W Y +++VVD+ D + + +R ELH ++++ L +LV NK D P A+S ++ E++ L +I +R + DWL Sbjct: 1 MGLYVSRL--FNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20 Identity = 54/152 (35.53%), Postives = 88/152 (57.89%), Query Frame = 1 Query: 118 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKV-TKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNST 570 K E ++ ++GL +AGKT+L+ + G + +PTVGFN+ + G V++ LWD+GGQ R+ W+ Y +VYV+D+ D LP S +EL ++L+ P++ G+P LVL NK + P+AL + ++ L+ D C + C T Sbjct: 10 KAEAQVVMMGLDSAGKTTLLYKLK-GHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQDH--CWELRGCSALT 158
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20 Identity = 54/175 (30.86%), Postives = 101/175 (57.71%), Query Frame = 1 Query: 85 AFLNWLRSLFF-KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISC---KNSTNIDTVIDWL 597 +F + + SLF K++ + +IGL AGK++L+ + G +PT+GFN+ + ++++ +WD+GGQ + R++W+ Y +AI++VVD+ D + + + E+ LL + L GI +L+ NK D A++ ++++ + L SI DR+ Y+ C K+ I DW+ Sbjct: 11 SFFSNIFSLFEGKKQTRILMIGLDGAGKSTLLYKLKLGDIVST-VPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRK--WYVQPCSAIKSPHGIYEGFDWV 182
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF5_RAT (ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20 Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 109 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 +F K++M + ++GL AGKT+++ + G IPT+GFN+ V ++ +WD+GGQ + R +W Y + +++VVD+ D + + S EL +L + L LLV NK D P A+ +L +++GL+ + R T + +DWL Sbjct: 12 IFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20 Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 109 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 +F K++M + ++GL AGKT+++ + G IPT+GFN+ V ++ +WD+GGQ + R +W Y + +++VVD+ D + + S EL +L + L LLV NK D P A+ +L +++GL+ + R T + +DWL Sbjct: 12 IFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20 Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 109 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 +F K++M + ++GL AGKT+++ + G IPT+GFN+ V ++ +WD+GGQ + R +W Y + +++VVD+ D + + S EL +L + L LLV NK D P A+ +L +++GL+ + R T + +DWL Sbjct: 12 IFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWL 173
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20 Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 109 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWL 597 LF K++M + ++GL AGKT+++ + G IPT+GFN+ V ++ +WD+GGQ + R +W Y + +++VVD+ D + + EL +L + L LL+ NK D P A++ ++ +++GL+S+ +R T + +DWL Sbjct: 12 LFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWL 173 The following BLAST results are available for this feature:
BLAST of FC870700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870700 ID=FC870700; Name=FC870700; organism=Citrus clementina; type=EST; length=866bpback to top |