FC870912

Overview
NameFC870912
Unique NameFC870912
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length966
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870912 vs. ExPASy Swiss-Prot
Match: MIOX_RAT (Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 6.894e-66
Identity = 123/271 (45.39%), Postives = 175/271 (64.58%), Query Frame = 2
Query:  128 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYALHRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 937
            PE      +FR+Y         V   Y+  H +QT DFV R R ++G  +  +M++ E  ++L++ VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGK+L    +GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL+NVLMSWGHD+Y+Y + K NK +LPS   +++R+HSFY  H    Y+ L +++D++ L W++ FNK+DLY+K     +V+ ++PYY  LI+KY P  L W
Sbjct:   19 PEMAKSKGSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAVDMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL--WGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMVRFHSFYPWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPEVKSLRPYYQGLIDKYCPGILSW 285          
BLAST of FC870912 vs. ExPASy Swiss-Prot
Match: MIOX_BOVIN (Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 6.894e-66
Identity = 128/271 (47.23%), Postives = 169/271 (62.36%), Query Frame = 2
Query:  128 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKY-FKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYALHRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 937
            PE      +FR+Y         V   Y+  H  QT DFV+R   ++G  +   M++ E  ++L+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL     GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL+NVLMSWGHD+YMY + K NK  LP    +IIR+HSFY  H+   Y+ L NE+D+  L W++ FNK+DLY+KS    DV  ++PYY  L++KY P  L W
Sbjct:   19 PEAAKDKDSFRNY-TSGPLLDRVFATYKLMHTWQTVDFVRRKHAQFGGFSYKRMTVMEAVDMLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLALA--GE-PQWAVVGDTFPVGCRPQASVVFRDCTFQDNPDLQDPLYSTELGMYQPHCGLENVLMSWGHDEYMYRMMKFNKFALPPEAFYIIRFHSFYPWHKFGDYQQLCNEQDLAMLPWVQEFNKFDLYTKSSSLPDVAALRPYYQGLVDKYCPGILCW 285          
BLAST of FC870912 vs. ExPASy Swiss-Prot
Match: MIOX_PIG (Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 9.004e-66
Identity = 126/271 (46.49%), Postives = 170/271 (62.73%), Query Frame = 2
Query:  128 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYALHRADAYKHLMNEEDIENLKWLKIFNKYDLYSKSKVRVDVEKVKPYYLSLIEKYFPEKLRW 937
            PE      +FR+Y         V   Y+  H  QT DFV++   ++G  +   M++ E  ++L+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL+    GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL+N LMSWGHD+YMY + K NK +LP    +IIR+HSFY  H    Y+ L NE+D+  L W++ FNK+DLY+K     DV++++PYY  LI+KY P  L W
Sbjct:   16 PEAAKDKGSFRNY-TSGPLLDRVFRTYKLMHTWQTVDFVRKKHAQFGGFSYKRMTVLEAVDMLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLVLA--GE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPVYSTELGMYQPHCGLENALMSWGHDEYMYQMMKFNKFSLPGEAFYIIRFHSFYPWHTGGDYRQLCNEQDLAMLPWVQEFNKFDLYTKGSDMPDVDELRPYYQGLIDKYCPGVLCW 282          
The following BLAST results are available for this feature:
BLAST of FC870912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX_RAT6.894e-6645.39Inositol oxygenase OS=Rattus norvegicus GN=Miox PE... [more]
MIOX_BOVIN6.894e-6647.23Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1[more]
MIOX_PIG9.004e-6646.49Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DC12ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2DC12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870912 ID=FC870912; Name=FC870912; organism=Citrus clementina; type=EST; length=966bp
GGGGGCAACAACAAGAAGGAGAAGGAGAATCACCAGGCTCTGCAATTGGC
ACAGGATGGCTGTTCTCGCTGATTCAAATGACAACGAATTGGAGCAGCTG
CAGGATGGAGGAGAAGGATTCACGGTGCCTGAGACTAATTCGTTTGGTCA
AACTTTCAGGGATTATGGTGTTGAAAGTGAGCGGCAAAAGGGCGTGGAGG
AATTCTATAGAACTCAACATATTAATCAGACCTGTGACTTTGTGAAAAGG
ATGAGAGAAGAGTATGGAAAACTGAATAGGGTGGAAATGAGTATATGGGA
ATGCTGTGAGCTACTAAATGAATTTGTTGATGAGAGTGATCCCGACCTTG
ATGAGCCTCAAATTGAGCACTTGCTGCAGACAGCCGAGGCCATTAGGAAG
GACTATCCTAATGAGGATTGGCTACATTTGACCGGTCTCATCCATGATCT
TGGAAAGGTTCTTCTTCATCCTGATTTTGGGGAACTTCCTCAGTGGGCTG
TTGTTGGTGACACATTCCCCGTTGGTTGTGCCTTTGATGAATCAATTGTT
CACCACAAGTATTTTAAGGAGAATCCAGACTACAACAATCCTGCTTTTAA
CACCAAATATGGAGCTTATTCAGAAGGCCGTGGATTAGACAATGTGTTGA
TGTCATGGGGCCATGATGACTACATGTACTTGGTAGCTAAGGAGAATAAG
ACCACTCTGCCGTCAGCCGGCCTTTTCATAATCAGATACCATTCTTTCTA
TGCCTTACACCGGGCAGATGCATATAAGCACTTGATGAATGAGGAAGATA
TTGAGAATCTGAAGTGGCTTAAAATATTCAACAAGTATGACCTCTACAGC
AAGAGCAAAGTTCGAGTTGATGTCGAGAAAGTCAAGCCATATTATCTCAG
TCTCATTGAAAAGTACTTTCCGGAAAAGCTGAGATGGTGAAATTTGGGGC
TCGAAAACAGGCTTGA
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