FC870924

Overview
NameFC870924
Unique NameFC870924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARFF_DICDI (ADP-ribosylation factor F OS=Dictyostelium discoideum GN=arrF PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.334e-41
Identity = 79/155 (50.97%), Postives = 111/155 (71.61%), Query Frame = 1
Query:    7 AGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRML--NEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 465
            AGK+T+LYKLK G+++ TIPTIGFNVE +EYKN+S  V D+GGQ+ IR LWR Y Q T   IFVVDS DR+R  E + E+  ++  N++E  +A LL+FANKQD+ N ++ AE+ + L L+SL  + W++Q   A  G+G+YEG DW+ +N + K
Sbjct:   36 AGKSTLLYKLKFGDVIRTIPTIGFNVEIIEYKNLSMNVWDIGGQNNIRALWRQYDQRTDVFIFVVDSTDRERFDEVKQEIKNIIEQNKNESSNASLLIFANKQDMLNPITPAELVNSLDLNSLTNKKWHVQPCSAVRGDGIYEGFDWIVSNSSGK 190          
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARFD_DICDI (ADP-ribosylation factor D OS=Dictyostelium discoideum GN=arrD PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.880e-41
Identity = 76/150 (50.67%), Postives = 110/150 (73.33%), Query Frame = 1
Query:    7 AGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 456
            +GKTTILYKL L E+V+TI T+G+NVET+++K+++ T+ D+ G+++IR LW+ ++     +IFVVDS+DR RI EA  EL +++ E+EL+   LL+FA KQD  + M   E+TD+LGLH ++ R WY+Q T    G G+YEGLDWLS  I
Sbjct:   28 SGKTTILYKLMLNEVVSTISTLGYNVETIQHKHLNLTLWDLAGEERIRTLWKPFYNKCTAIIFVVDSSDRLRIDEAASELAKLMKEEELKGCSLLIFATKQDCISPMEIPELTDQLGLHDIKDRRWYVQPTRTLEGIGIYEGLDWLSTKI 177          
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 8.091e-39
Identity = 75/150 (50.00%), Postives = 107/150 (71.33%), Query Frame = 1
Query:    7 AGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 456
            AGKTTILY+  + E+V T PTIG NVE +  KN  F + D+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   ++EL+RML  ++LR A +L+FANKQD+   M+AAEI+  L L S++   W+IQS CA +GEGL +GL+W+++ I
Sbjct:   27 AGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176          
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.091e-39
Identity = 75/150 (50.00%), Postives = 107/150 (71.33%), Query Frame = 1
Query:    7 AGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 456
            AGKTTILY+  + E+V T PTIG NVE +  KN  F + D+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   ++EL+RML  ++LR A +L+FANKQD+   M+AAEI+  L L S++   W+IQS CA +GEGL +GL+W+++ I
Sbjct:   27 AGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176          
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.075e-38
Identity = 74/150 (49.33%), Postives = 105/150 (70.00%), Query Frame = 1
Query:    7 AGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 456
            AGKTTILY+  + E+V T PTIG NVE +   N  F + D+GGQ+ +RP W  Y+ NT+ +I VVDS DR+RI   R+EL++ML  ++LR A LL+FANKQD+   M+ AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   27 AGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.245e-38
Identity = 73/151 (48.34%), Postives = 107/151 (70.86%), Query Frame = 1
Query:    4 AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 456
            AAGKTT LYKL L E+V+T PT+G N+E   Y+NI   + D+GGQD +R  W  Y+ NTQ +I V+DS DR R+   ++EL +ML  + L+ +++L++ANKQDL +AMS  E++  L LHS++   ++IQ+ CA +G+GL  GLDWL ++I
Sbjct:   30 AAGKTTTLYKLLLDEVVSTTPTVGSNLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWLVSHI 180          
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 73/150 (48.67%), Postives = 104/150 (69.33%), Query Frame = 1
Query:    7 AGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 456
            AGKTTILY+  + E+V T PTIG NVE +   N  F + D+GGQ+ +R  W  Y+ NT+ +I VVDS DR+RI   R+EL++ML  ++LR A LL+FANKQD+   M+ AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   27 AGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 73/150 (48.67%), Postives = 104/150 (69.33%), Query Frame = 1
Query:    7 AGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 456
            AGKTTILY+  + E+V T PTIG NVE +   N  F + D+GGQ+ +R  W  Y+ NT+ +I VVDS DR+RI   R+EL++ML  ++LR A LL+FANKQD+   M+ AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   27 AGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 73/150 (48.67%), Postives = 104/150 (69.33%), Query Frame = 1
Query:    7 AGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 456
            AGKTTILY+  + E+V T PTIG NVE +   N  F + D+GGQ+ +R  W  Y+ NT+ +I VVDS DR+RI   R+EL++ML  ++LR A LL+FANKQD+   M+ AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   27 AGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of FC870924 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.573e-37
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 1
Query:    7 AGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVRDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMSAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 465
            AGKTTIL K    +I T  PT+GFN++T+E++     + DVGGQ  +R  WR+YF++T GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANKQDLP A+S+  I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:   27 AGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 179          
The following BLAST results are available for this feature:
BLAST of FC870924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
ARFF_DICDI1.334e-4150.97ADP-ribosylation factor F OS=Dictyostelium discoid... [more]
ARFD_DICDI3.880e-4150.67ADP-ribosylation factor D OS=Dictyostelium discoid... [more]
ARL5B_MOUSE8.091e-3950.00ADP-ribosylation factor-like protein 5B OS=Mus mus... [more]
ARL5B_HUMAN8.091e-3950.00ADP-ribosylation factor-like protein 5B OS=Homo sa... [more]
ARL5A_MOUSE3.075e-3849.33ADP-ribosylation factor-like protein 5A OS=Mus mus... [more]
ARL5_DICDI5.245e-3848.34ADP-ribosylation factor-like protein 5 OS=Dictyost... [more]
ARL5A_RAT2.603e-3748.67ADP-ribosylation factor-like protein 5A OS=Rattus ... [more]
ARL5A_HUMAN2.603e-3748.67ADP-ribosylation factor-like protein 5A OS=Homo sa... [more]
ARL5A_BOVIN2.603e-3748.67ADP-ribosylation factor-like protein 5A OS=Bos tau... [more]
ARL2_BOVIN7.573e-3748.37ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DD02ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2DD02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870924 ID=FC870924; Name=FC870924; organism=Citrus clementina; type=EST; length=742bp
GGGGCTGCTGGTAAGACCACTATCTTGTACAAGCTCAAGCTTGGAGAGAT
TGTCACCACAATTCCTACCATTGGGTTTAATGTGGAGACCGTTGAATATA
AAAACATCAGTTTCACTGTGCGGGATGTTGGTGGCCAGGACAAGATTCGT
CCCTTGTGGAGGCATTATTTCCAGAACACTCAAGGTCTCATTTTTGTTGT
GGACAGCAATGACAGAGACCGTATTGTAGAAGCAAGGGATGAATTGCATA
GGATGTTGAATGAGGATGAGCTGCGAGATGCAGTGTTGCTTGTATTTGCT
AACAAACAGGATCTTCCAAATGCAATGAGTGCTGCTGAGATTACTGATAA
GCTTGGCCTCCACTCCCTCAGGCAGCGCCACTGGTACATCCAGAGCACCT
GTGCAACCTCTGGTGAGGGTCTTTATGAAGGTCTGGATTGGCTCTCCAAC
AACATCGCTAACAAGGCCTGAAGCTGTTAAGATCTTTTTGCGGACTGGCA
ATTCTGGATGCAGGGGTGAATATTATCTATTTTTTTTTCTTTTTAACCCT
TTTTGTTTGAGACGTTTGGGTTGTTGTGTTGTTTTGGTCCTAGGATCTTT
ACAACTATATTGTAATAGAAGAATTGTTGGTTGGATACATGTACTCCAAG
GTTTTTGGCTCGGTTTAGATATCTGTAATTGAAACTAATTTGGTGCACCA
CTCATATTTGAAATTGTTTTTTTAAAAAAAAAAAAAAAAAAA
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