FC871089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: FUMC_LISIN (Fumarate hydratase class II OS=Listeria innocua GN=fumC PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.131e-23 Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 335 + S G+FELNV+KP+I L S+ LL D+ SF +C+ G+ AN I +++SLMLVT+LNP IGY+ AA +AK A E TTLK+AA+K G + +EFD + P KM Sbjct: 342 IAASQGNFELNVYKPVIIFNFLESITLLSDSMRSFRIHCLEGLTANESVIEAKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKEFDLWIDPLKM 452
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: FUMC_CHLPN (Fumarate hydratase class II OS=Chlamydia pneumoniae GN=fumC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.783e-23 Identity = 53/113 (46.90%), Postives = 75/113 (66.37%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 +GGS G+FELNV KP+I L S+ LL + +F + V+G++ N+ R+ ++ SLMLVT+L P +GYD + A KA E +LK+A L LG L+ +EFD LVVPE M+G Sbjct: 346 IGGSRGNFELNVMKPVIIYNFLQSVDLLSEGMRAFSEFFVKGLKVNKARLQDNINNSLMLVTALAPVLGYDKCSKAALKAFHESISLKEACLALGYLSEKEFDRLVVPENMVG 458
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: FUMC_CHLCV (Fumarate hydratase class II OS=Chlamydophila caviae GN=fumC PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.381e-22 Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 +GGS G+FELNV KP+I L S+ +L +F V G++ N+ R+ + L SLMLVT+L P +GYD + +A KA + LK+A +++G L++EEFD LVVPE M+G Sbjct: 346 MGGSRGNFELNVMKPVIIYNFLQSVDILAGGMQAFADYFVSGLRVNKPRLKEYLDNSLMLVTALTPVLGYDKCSKMALKAFHDNINLKEACIQMGYLSAEEFDRLVVPESMVG 458
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: FUMC_BLOFL (Fumarate hydratase class II OS=Blochmannia floridanus GN=fumC PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.356e-22 Identity = 51/114 (44.74%), Postives = 78/114 (68.42%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 344 +GGS+G +LN ++P+I L S+RLL D+ +F C+ GI+ +RI KLL++SLMLVT+L+ IGYD +A +A+ A+ G TLK A+++ G + ++FD+ V PE MI P Sbjct: 333 LGGSSGQLQLNTYRPLIIYNFLQSIRLLTDSIKNFHDYCIVGIRPKFKRIEKLLNKSLMLVTALSSHIGYDKSAQIAQTAYLNGITLKAASIQSGYVTEKQFDDWVCPENMIYP 446
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: FUMC_PROMA (Fumarate hydratase class II OS=Prochlorococcus marinus GN=fumC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.169e-21 Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 + GS GH ++N +KP+IA LL S+ LL A S + GI+ N E+I L SLML+TSL P IGY+ A+ +A+ AH++ TLK+A LG LN ++FD +V P+ M G Sbjct: 350 MAGSGGHLQMNSYKPLIAFNLLESIDLLSSACKSSRILMIEGIEPNLEKIQNSLQNSLMLITSLTPIIGYEKASKIAQCAHEKDITLKEATKLLGYLNEDDFDRIVNPQSMTG 462
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: FUMC2_BRAJA (Fumarate hydratase class II 2 OS=Bradyrhizobium japonicum GN=fumC2 PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 3.402e-21 Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 6 GGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 344 GG+ G+ E+NV+KP+I + S+ +L D +F V G + NR++I + + SLMLVT+L P IGYD A+ +A A TLK AALKLG + EFD +V P KM+ P Sbjct: 350 GGAGGYLEMNVYKPLIIHNIAQSVTILTDGCTNFRTFLVEGTEPNRKKIKEYVERSLMLVTALAPVIGYDKASRIAHYAMDNDLTLKSAALKLGFVTEPEFDRIVDPAKMVKP 462
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: FUMC_CHLMU (Fumarate hydratase class II OS=Chlamydia muridarum GN=fumC PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.415e-20 Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 G+ G+FELNV KP+I L S+ LL A SF V G++ NR ++ + + SLMLVT+L P +GYD + +A KA E +LK+A + LG L+ +EFD VVP M+G Sbjct: 348 GTKGNFELNVMKPVIIYDFLQSVNLLSGAMRSFADYFVSGLKVNRGQLQQNVERSLMLVTALAPVLGYDKCSKIALKAFHENLSLKEACVSLGFLSEQEFDTHVVPGLMLG 458
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: FUMC_CHLTR (Fumarate hydratase class II OS=Chlamydia trachomatis GN=fumC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.184e-19 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 G+ G+FELNV KP+I L S+ LL A SF V G++ N+ ++ + + SLMLVT+L P +GYD + +A KA E +LK+A + LG L+ +EFD V+P M+G Sbjct: 348 GTKGNFELNVMKPVIIYDFLQSVNLLAGAMRSFADYFVCGLKVNKGQLQQNVERSLMLVTALAPVLGYDKCSKIALKAFHENLSLKEACVSLGFLSEKEFDEHVIPGLMVG 458
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: FUMC_PROMP (Fumarate hydratase class II OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fumC PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.210e-18 Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 338 + ++G ++N +KP+I +L S++LL A ++F V GIQ N + I L SLMLVT+L PKIGY+ AA +A A E LK+A +KLG L + EF++ + KMI Sbjct: 350 IANASGTLQMNEYKPLIGFNILTSIKLLNHAISNFRLKLVEGIQPNPKTIKANLENSLMLVTALVPKIGYEKAAEIANLAFNESINLKEATIKLGYLTANEFEDAINTNKMI 461
BLAST of FC871089 vs. ExPASy Swiss-Prot
Match: ASPA_HELPY (Aspartate ammonia-lyase OS=Helicobacter pylori GN=aspA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.338e-17 Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 344 + G +LNVF+P+IA L HS +LG A + CV GI AN + + S+ +VT+LNP IGY+ +A +AK+A K ++ D AL+ +L E+ D++ PE M+ P Sbjct: 347 LAAEGGQLQLNVFEPVIAYKLFHSFVILGRAIETLTTKCVEGITANEKICHDYVFNSIGIVTALNPHIGYEKSAMIAKEALKSDRSIYDIALEKKILTKEQLDDIFKPENMLSP 460 The following BLAST results are available for this feature:
BLAST of FC871089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871089 ID=FC871089; Name=FC871089; organism=Citrus clementina; type=EST; length=501bpback to top |