FC872123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: DOIAD_STRFR (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces fradiae GN=neoA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.768e-13 Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 2 Query: 83 ACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPI 529 A VF+ + +D P P PGE LVRV Y+ VC +DL +KG W P+V GHE +G +V + +L VG+NV + L SC C +C G C G++ DG +Y ++ P+PD LPL A + Sbjct: 3 ALVFEAPERAVLTHRDIPAPA-----PGEALVRVAYNSVCGSDLSFYKGVWHGFT-YPVVPGHEWSGSVVDVNGPRGADL-VGRNV-VGDLTCSCGTCAHCAAGTPTLCEDLGELGFTRDGACAEYMTVPVANLRPLPDTLPLRTACQV 143
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_RHIE6 (L-threonine 3-dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=tdh PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.921e-13 Identity = 53/150 (35.33%), Postives = 75/150 (50.00%), Query Frame = 2 Query: 119 FVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 +++D PVP+ + P +VL+RV S +C TD+H W D W K +P+V GHE +G I IG +T VG+ V + C C NCR G C G + G+F ++ +V PIPD + E AA G V+ AL Sbjct: 18 WMEDVPVPE---VGPNDVLIRVKKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFSGEIAEIG-SAVTRYHVGERVSGEGHI-VCGKCRNCRAGRGHLCRNTLGVGVNRPGSFGEFVCIPESNVVPIPDDISDEIAAIFDPFGNAVHTAL 162
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.921e-13 Identity = 67/224 (29.91%), Postives = 93/224 (41.52%), Query Frame = 2 Query: 158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC---SQAQCSGYSVD------------------GTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEK 763 + GEVL+R ++GVCHTD G P + P+V GHEGAG +VA+G+G L ++K G +V I C +CE CR G C Q G D TF +Y+V + I EQ + C T A+ N +K + G A R+IAIDT K +L +GA ++ D+ P K Sbjct: 35 RKGEVLIRNTHTGVCHTDAFTLSGSDP-EGVFPVVLGHEGAGVVVAVGEGVL-SVKPGDHV-IPLYTAECGECEFCRSGKTNLCVSVRDTQGKGLMPDCTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQFGATDCLNPNDYDKPIK 255
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_SULSR (NAD-dependent alcohol dehydrogenase OS=Sulfolobus sp. (strain RC3) GN=adh PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.921e-13 Identity = 57/214 (26.64%), Postives = 98/214 (45.79%), Query Frame = 2 Query: 122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDW-------PAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIK-WLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAM-GLRVIAIDTGDDKRKLCASYGADKFVD 736 +KD +P+ K +VL++V+ +GVCH+D+H +G + +LP+ GHE AG I +GD + K G V + W + +C CR G E C + G + DG + +Y ++ L +A+P+ C+G+T YRA+ + P + Q A A+ G +I +D ++ + GAD ++ Sbjct: 15 LKDIDIPKP---KGAQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEMGDEVVGYSK-GDLVAVNPWQGEG--NCYYCRIGEEHLCDSPRWLGINFDGAYAEYVLNPHYKYMYKLRRLNAVEASPLTCSGITTYRAVRKASLDPTKTLVVVGAGGGLGTMAVQIAKAVGGATIIGVDVREEAVETAKRAGADYVIN 222
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_SULSO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus solfataricus GN=adh PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.921e-13 Identity = 61/219 (27.85%), Postives = 102/219 (46.58%), Query Frame = 2 Query: 158 KPGEVLVRVDYSGVCHTDLHAWKGDW-------PAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIK-WLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYA-VSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAM-GLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 784 K +VL++V+ +GVCH+D+H +G + +LP+ GHE AG I +GD + K G V + W + +C CR G E C + G + DG + +Y V + +++ + L +AAP+ C+G+T YRA+ + P + Q A A+ G +I +D ++ + GAD +V DP I+ I + Sbjct: 24 KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK-GDLVAVNPWQGEG--NCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD-YVINASMQDPLAEIRRITE 237
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.921e-13 Identity = 59/222 (26.58%), Postives = 93/222 (41.89%), Query Frame = 2 Query: 158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCR---------------EGI------EATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757 + GEV ++V +GVCHTD + G P + P++ GHEGAG + ++G+G +T K G V I C +C+ C+ G+ TC Q + TF +Y V + + PL++ + C T Y A LN +K PG A R+I +D +K A +GA + ++ +DH+ P Sbjct: 32 RAGEVRIKVVATGVCHTDAYTLSGSDP-EGAFPVILGHEGAGLVESVGEG-VTKFKAGDTV-IPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLMPDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHARP 250
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_PYRAB (Probable L-threonine 3-dehydrogenase OS=Pyrococcus abyssi GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 65/216 (30.09%), Postives = 99/216 (45.83%), Query Frame = 2 Query: 161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRL--PLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAA---PILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMG-LRVIAIDTGDDKRKLCASYGADKFVD-FEDHSDPEKFIKAIKDM 787 PGEVL++V + +C TDLH ++ + A+ R+ P + GHE AG +V +G G + ++VG V ++ C C CR G C + G DG F +YAV A++V P +P E A P+ A TV ++ K+ A A G VI + D +R+L GAD ++ FE E +K + D+ Sbjct: 29 PGEVLIKVIATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPG-VEGIEVGDYVSVETHI-VCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNVWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS------VLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE-----EDVVKEVMDI 231
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_FRATW (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNV-GIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 + D P+P+ +VL+++ + +C TDLH + D W +P++ GHE AG +VA GDG +T++ +G V G L C C NCR G C + G +V G F +Y V A +V IPD + + A+ G ++ AL Sbjct: 16 INDAPIPEYGY---NDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDG-VTSVDIGDRVSGEGHLV--CGQCRNCRAGKRHLCRKTIGIGVNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTAL 159
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_FRATT (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNV-GIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 + D P+P+ +VL+++ + +C TDLH + D W +P++ GHE AG +VA GDG +T++ +G V G L C C NCR G C + G +V G F +Y V A +V IPD + + A+ G ++ AL Sbjct: 16 INDAPIPEYGY---NDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDG-VTSVDIGDRVSGEGHLV--CGQCRNCRAGKRHLCRKTIGIGVNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTAL 159
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_FRATO (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNV-GIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 + D P+P+ +VL+++ + +C TDLH + D W +P++ GHE AG +VA GDG +T++ +G V G L C C NCR G C + G +V G F +Y V A +V IPD + + A+ G ++ AL Sbjct: 16 INDAPIPEYGY---NDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDG-VTSVDIGDRVSGEGHLV--CGQCRNCRAGKRHLCRKTIGIGVNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTAL 159 The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bpback to top |