FC872123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_FRATM (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNV-GIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 + D P+P+ +VL+++ + +C TDLH + D W +P++ GHE AG +VA GDG +T++ +G V G L C C NCR G C + G +V G F +Y V A +V IPD + + A+ G ++ AL Sbjct: 16 INDAPIPEYGY---NDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDG-VTSVDIGDRVSGEGHLV--CGQCRNCRAGKRHLCRKTIGIGVNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTAL 159
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_FRATH (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNV-GIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 + D P+P+ +VL+++ + +C TDLH + D W +P++ GHE AG +VA GDG +T++ +G V G L C C NCR G C + G +V G F +Y V A +V IPD + + A+ G ++ AL Sbjct: 16 INDAPIPEYGY---NDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDG-VTSVDIGDRVSGEGHLV--CGQCRNCRAGKRHLCRKTIGIGVNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTAL 159
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_FRATF (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNV-GIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 + D P+P+ +VL+++ + +C TDLH + D W +P++ GHE AG +VA GDG +T++ +G V G L C C NCR G C + G +V G F +Y V A +V IPD + + A+ G ++ AL Sbjct: 16 INDAPIPEYGY---NDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDG-VTSVDIGDRVSGEGHLV--CGQCRNCRAGKRHLCRKTIGIGVNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTAL 159
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_FRAT1 (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNV-GIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 + D P+P+ +VL+++ + +C TDLH + D W +P++ GHE AG +VA GDG +T++ +G V G L C C NCR G C + G +V G F +Y V A +V IPD + + A+ G ++ AL Sbjct: 16 INDAPIPEYGY---NDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDG-VTSVDIGDRVSGEGHLV--CGQCRNCRAGKRHLCRKTIGIGVNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTAL 159
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_XANCP (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris GN=tdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13 Identity = 48/132 (36.36%), Postives = 67/132 (50.76%), Query Frame = 2 Query: 134 PVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKPRLP-LVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAA 523 PVP P EVL++++ + +C TDLH + D W + P L GHE G + +G +T +VGQ V + C C NCR G C G +V+G F +Y V A ++ PIPD +P E AA Sbjct: 19 PVPTPG---PNEVLIKLEKTAICGTDLHIYLWDEWSQRTITPGLTIGHEFVGRVAELGSA-VTGYQVGQRVSAEGHI-VCGHCRNCRGGRPHLCPNTVGIGVNVNGAFAEYMVMPASNLWPIPDQIPSELAA 145
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_XANCB (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=tdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13 Identity = 48/132 (36.36%), Postives = 67/132 (50.76%), Query Frame = 2 Query: 134 PVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKPRLP-LVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAA 523 PVP P EVL++++ + +C TDLH + D W + P L GHE G + +G +T +VGQ V + C C NCR G C G +V+G F +Y V A ++ PIPD +P E AA Sbjct: 19 PVPTPG---PNEVLIKLEKTAICGTDLHIYLWDEWSQRTITPGLTIGHEFVGRVAELGSA-VTGYQVGQRVSAEGHI-VCGHCRNCRGGRPHLCPNTVGIGVNVNGAFAEYMVMPASNLWPIPDQIPSELAA 145
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_XANC8 (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=tdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13 Identity = 48/132 (36.36%), Postives = 67/132 (50.76%), Query Frame = 2 Query: 134 PVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKPRLP-LVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAA 523 PVP P EVL++++ + +C TDLH + D W + P L GHE G + +G +T +VGQ V + C C NCR G C G +V+G F +Y V A ++ PIPD +P E AA Sbjct: 19 PVPTPG---PNEVLIKLEKTAICGTDLHIYLWDEWSQRTITPGLTIGHEFVGRVAELGSA-VTGYQVGQRVSAEGHI-VCGHCRNCRGGRPHLCPNTVGIGVNVNGAFAEYMVMPASNLWPIPDQIPSELAA 145
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_XANAC (L-threonine 3-dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=tdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13 Identity = 51/149 (34.23%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 83 ACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKPRLP-LVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAA 523 A V ++ N I +++ PVP P EVL++++ + +C TDLH + D W + P L GHE G + +G +T ++GQ V + C C NCR G C G +V+G F +Y V A ++ PIPD +P E AA Sbjct: 3 ALVKREANKGI-WLEQVPVPTPG---PNEVLIKLEKTAICGTDLHIYLWDEWSQRTIEPGLTIGHEFVGRVAELGSA-VTGYQIGQRVSAEGHI-VCGHCRNCRGGRPHLCPNTVGIGVNVNGAFAEYMVMPASNLWPIPDQIPSELAA 145
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_PYRHO (Probable L-threonine 3-dehydrogenase OS=Pyrococcus horikoshii GN=tdh PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13 Identity = 65/216 (30.09%), Postives = 99/216 (45.83%), Query Frame = 2 Query: 161 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRL--PLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAA---PILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMG-LRVIAIDTGDDKRKLCASYGADKFVD-FEDHSDPEKFIKAIKDM 787 PGEVL++V + +C TDLH ++ + A+ R+ P + GHE AG +V IG G + ++VG V ++ C C CR G C + G DG F +YAV A+++ P +P E A P+ A TV ++ K+ A A G VI + D +R+L GAD ++ FE E +K + D+ Sbjct: 29 PGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPG-VEGIEVGDYVSVETHI-VCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS------VLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE-----EDVVKEVMDI 231
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_FRATN (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. novicida (strain U112) GN=tdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13 Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 122 VKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNV-GIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562 + D P+P+ +VL+++ + +C TDLH + D W +P++ GHE AG +VA GDG +T++ +G V G L C C NCR G C + G +V G F +Y V A +V IPD + + A+ G ++ AL Sbjct: 16 IDDAPIPEYGY---NDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDG-VTSVDIGDRVSGEGHLV--CGQCRNCRAGKRHLCRKTIGIGVNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTAL 159 The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bpback to top |