FC872123

Overview
NameFC872123
Unique NameFC872123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 7.105e-12
Identity = 57/167 (34.13%), Postives = 82/167 (49.10%), Query Frame = 2
Query:  101 HNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWK----GDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQ-CSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPG 586
            HN     ++  PVP   D+   EVL++V   G+C +DLH +     G++  +   P + GHE AG I A+G  ++   KVG  V ++    +C  CE C+EG    C   Q  +   VDG F QY       V  IPD L  E+AA I    V ++ A   +K +PG
Sbjct:   15 HNTREIKIETLPVP---DINHDEVLIKVMAVGICGSDLHYYTNGRIGNYVVEK--PFILGHECAGEIAAVGS-SVDQFKVGDRVAVE-PGVTCGRCEACKEGRYNLCPDVQFLATPPVDGAFVQYIKMRQDFVFLIPDSLSYEEAALIEPFSVGIH-AAARTKLQPG 173          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.105e-12
Identity = 61/222 (27.48%), Postives = 89/222 (40.09%), Query Frame = 2
Query:  158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSG-----YSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            K  EV +++  + VCHTD +   G  P +   P++ GHEGAG + ++G+G +T LK G  V I      C +C+ C       C                S+  C G     Y    TF +Y V     V  I    PL++   + C   T Y A LN +K  PG                     A   R+I +D   DK      +GA + ++ +D S P
Sbjct:   31 KAHEVRIKIIATAVCHTDAYTLSGADP-EGNYPVILGHEGAGIVESVGEG-VTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECINPQDFSKP 249          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_BACLD (L-threonine 3-dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tdh PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12
Identity = 61/217 (28.11%), Postives = 94/217 (43.32%), Query Frame = 2
Query:  134 PVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRL--PLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAI 778
            P+P+   +   EVL++V  + +C TD+H +  D  AK R+  P V GHE +G +V +G+  +T +K G+ V  +     C  C  C  G E  C +    G   DG F +Y    A ++   P G+P + A+     G  V+  L    A  G                    A+   +VIAID  + +  L    GA   +  E   DP K + A+
Sbjct:   23 PIPK---IDKHEVLIKVKAASICGTDVHIYNWDEWAKSRVKPPYVFGHEFSGEVVQVGEN-VTTVKEGEYVSAETHI-VCGKCLPCLTGKEHVCKKTLILGVDTDGCFAEYVKMPAANIWKNPAGMPEDLASIQEPLGNAVHTVLTGMTA--GVKVAVVGCGPIGLMAVAVAKASGAAQVIAIDKNEYRLDLALQMGATDIISVE-KEDPLKNVSAL 231          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12
Identity = 60/221 (27.15%), Postives = 91/221 (41.18%), Query Frame = 2
Query:  158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQ---------------CSG-----YSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNS-KARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            K  EV +++  +GVC TD+        +K   P++ GHEG G + ++G+G +++++ G  V I      C +C+ C       C++ +               C G     Y   G+F +Y V     V  I +G PLE+   I C   T Y A +NS K  PG                    AA   R+IA+D   D+     + GA   VD  D   P
Sbjct:   33 KAKEVRIKMVATGVCGTDIKHLDTQELSK-FCPMIMGHEGVGIVESVGEG-VSSVRTGDKV-ILLCIPQCGECKTCLNSKNNICTEIRLSKTHLASEGTSRITCKGKLVHQYIALGSFSEYTVLKEISVAKIDEGAPLEKVCIIGCGFATGYGAAINSAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDRFAKAKTVGATDCVDPRDFEKP 250          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_RHISN (L-threonine 3-dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=tdh PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.212e-11
Identity = 51/145 (35.17%), Postives = 70/145 (48.28%), Query Frame = 2
Query:  134 PVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562
            PVP+   + P +VL+RV  S +C TD+H W  D W  K   +P+V GHE  G I  +G   +T   VG+ V  +     C  C NCR G    C      G +  G+F ++      +V  IPD +P E AA     G  V+ AL
Sbjct:   23 PVPE---VGPNDVLIRVKKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFMGEIAEVG-SAVTKHHVGERVSGEGHI-VCGKCRNCRAGRGHLCRNTLGVGVNRPGSFAEFVCLPEYNVVTIPDDVPDEIAAIFDPFGNAVHTAL 162          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.212e-11
Identity = 60/222 (27.03%), Postives = 89/222 (40.09%), Query Frame = 2
Query:  158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSG-----YSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            K  EV +++  + VCHTD +   G  P +   P++ GHEGAG + ++G+G +T LK G  V I      C +C+ C       C                S+  C G     Y    TF +Y V     V  I    PL++   + C   T Y A +N +K  PG                     A   R+I +D   DK      +GA + ++ +D S P
Sbjct:   31 KAHEVRIKIIATAVCHTDAYTLSGADP-EGSFPVILGHEGAGIVESVGEG-VTKLKAGDTV-IPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKP 249          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.583e-11
Identity = 59/229 (25.76%), Postives = 100/229 (43.67%), Query Frame = 2
Query:  140 PQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNS-KARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            P QA+    EV +++ ++ +CHTD +   G  P +   P + GHE AG + ++G+G +T++K G +V   + A+ C +C+ C+      C + +             S +SV G          TF QY V +   V  I    PL++   + C   T   A+ N+ K  PG                    +A   R+I ID   +K     ++G  +F++ +DH  P
Sbjct:   30 PPQAN----EVRIQILFTALCHTDAYTLGGKDP-EGLFPCILGHEAAGIVESVGEG-VTDVKPGDHVIPSYQAE-CGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKP 251          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.583e-11
Identity = 63/232 (27.16%), Postives = 94/232 (40.52%), Query Frame = 2
Query:  158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSGYSV-----DGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKDM 787
            K  EV +++  + VCHTD +   G  P +   P++ GHEGAG + ++G+G +T LK G  V I      C +C+ C       C                S+  C G SV       TF +Y V     V  I    PL++   + C   T Y A +N +K  PG                     A   R+I ID   DK      +GA + +       P+ F K+I+++
Sbjct:   31 KAHEVRIKILATAVCHTDAYTLSGADP-EGCFPVILGHEGAGIVESVGEG-VTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASECI------SPQDFSKSIQEV 253          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.583e-11
Identity = 61/235 (25.96%), Postives = 100/235 (42.55%), Query Frame = 2
Query:  137 VPQQADLKPG---EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            V ++ D+ P    EV +++ Y+ +CHTD++ W  KG  P  PR   + GHE AG + ++G+G +T L  G +V +      C DC +C+      CS  +             S +S++G          TF +Y V +   V  I    PL++   + C   T   A LN +K   G                     A   R+I +D    + +    +G  +FV+ +D+S P
Sbjct:   24 VMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPR---ILGHEAAGIVESVGEG-VTELAPGDHV-LPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKP 253          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.583e-11
Identity = 61/235 (25.96%), Postives = 100/235 (42.55%), Query Frame = 2
Query:  137 VPQQADLKPG---EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            V ++ D+ P    EV +++ Y+ +CHTD++ W  KG  P  PR   + GHE AG + ++G+G +T L  G +V +      C DC +C+      CS  +             S +S++G          TF +Y V +   V  I    PL++   + C   T   A LN +K   G                     A   R+I +D    + +    +G  +FV+ +D+S P
Sbjct:   24 VMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPR---ILGHEAAGIVESVGEG-VTELAPGDHV-LPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKP 253          
The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
DHSO_BACSU7.105e-1234.13Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]
ADHX_BOVIN7.105e-1227.48Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
TDH_BACLD9.280e-1228.11L-threonine 3-dehydrogenase OS=Bacillus lichenifor... [more]
ADH6_RAT9.280e-1227.15Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
TDH_RHISN1.212e-1135.17L-threonine 3-dehydrogenase OS=Rhizobium sp. (stra... [more]
ADHX_HORSE1.212e-1127.03Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_PEA1.583e-1125.76Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_MOUSE1.583e-1127.16Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADH3_SOLTU1.583e-1125.96Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU1.583e-1125.96Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bp
GGGGACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGT
CACAAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGAC
CACAATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGC
TGACCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTAT
GCCACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGT
CTACCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGG
AGACGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAAT
GGCTCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAG
GCTACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTT
CCAACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACG
GATTACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTC
TATCGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCAT
TGTGGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCG
CCATGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAA
CTTTGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTC
GGATCCCGAGAAGTTTATCAAAGCGATCAAGGATATGT
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