FC872123

Overview
NameFC872123
Unique NameFC872123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.583e-11
Identity = 61/235 (25.96%), Postives = 101/235 (42.98%), Query Frame = 2
Query:  137 VPQQADLKPG---EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            V ++ D+ P    EV +++ Y+ +CHTD++ W  KG  P  PR   + GHE AG + ++G+G +T+L  G +V +      C DC +C+      CS  +             S +S++G          TF +Y V +   V  I    PL++   + C   T   A LN +K   G                     A   R+I +D    + +    +G  +FV+ +D+S P
Sbjct:   24 VMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPR---ILGHEAAGIVESVGEG-VTDLAPGDHV-LPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKP 253          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_RHIME (L-threonine 3-dehydrogenase OS=Rhizobium meliloti GN=tdh PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.067e-11
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 2
Query:  134 PVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562
            PVP+   + P +VL+RV  S +C TD+H W  D W  K   +P+V GHE  G +V +G   ++   VG+ V  +     C  C NCR G    C      G +  G+F ++      +V  IPD +P E AA     G  V+ AL
Sbjct:   23 PVPE---IGPNDVLIRVRKSAICGTDVHIWNWDQWAEKTIPVPMVVGHEFMGEVVEVGP-AVSKHHVGERVSGEGHI-VCGKCRNCRAGRGHLCRNTLGVGVNRPGSFAEFVCLPEYNVVSIPDDVPDEIAAIFDPFGNAVHTAL 162          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.067e-11
Identity = 55/222 (24.77%), Postives = 94/222 (42.34%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            EV V++ Y+ +CHTD++ W  KG  P  PR   + GHE  G + ++G+G +T L  G +V +      C +C++C+      C   +             S +++ G          TF +Y V +   +  I    PL++   + C   T + A +N +K + GQ                    +   R+I +D    K +    +G   FV+ +DHS P
Sbjct:   36 EVRVKILYTALCHTDVYFWEAKGQTPVFPR---ILGHEAGGIVESVGEG-VTELAPGDHV-LPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKP 252          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.067e-11
Identity = 55/222 (24.77%), Postives = 94/222 (42.34%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            EV V++ Y+ +CHTD++ W  KG  P  PR   + GHE  G + ++G+G +T L  G +V +      C +C++C+      C   +             S +++ G          TF +Y V +   +  I    PL++   + C   T + A +N +K + GQ                    +   R+I +D    K +    +G   FV+ +DHS P
Sbjct:   36 EVRVKILYTALCHTDVYFWEAKGQTPVFPR---ILGHEAGGIVESVGEG-VTELAPGDHV-LPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKP 252          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.067e-11
Identity = 61/235 (25.96%), Postives = 100/235 (42.55%), Query Frame = 2
Query:  137 VPQQADLKPG---EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            V ++ D+ P    EV +++ Y+ +CHTD++ W  KG  P  PR   + GHE AG + ++G+G +T L  G +V +      C DC +C+      CS  +             S +S++G          TF +Y V +   V  I    PL++   + C   T   A LN +K   G                     A   R+I +D    + +    +G  +FV+ +D+S P
Sbjct:   24 VMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPR---ILGHEAAGIVESVGEG-VTELGPGDHV-LPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKP 253          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: XYLB_PSEPU (Aryl-alcohol dehydrogenase OS=Pseudomonas putida GN=xylB PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11
Identity = 60/228 (26.32%), Postives = 99/228 (43.42%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQA---QCSGYSVDG--------------------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMG-LRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAI 778
            +VLVR+  +G+CHTDL      +P    LP+V GHEGAG +  +G   +  ++ G +V + +   +C  C+ C  G   +C+ +      G SV G                    +F  YA+SY R+   +   +PLE   P+ C   T   ++LN+   P                    A   G   +IA+D  +++ +L +  GA   ++    +DP + IK I
Sbjct:   29 QVLVRLVATGLCHTDLVCRDQHYPVP--LPMVFGHEGAGVVERVGSA-VKKVQPGDHVVLTFY--TCGSCDACLSGDPTSCANSFGPNFMGRSVTGECTIHDHQGAEVGASFFGQSSFATYALSYERNTVKVTKDVPLELLGPLGCGIQTGAGSVLNALNPPAGSAIAIFGAGAVGLSAVMAAVVAGCTTIIAVDVKENRLELASELGATHIIN-PAANDPIEAIKEI 250          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: DOIAD_STRRI (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces ribosidificus GN=rbmC PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11
Identity = 43/126 (34.13%), Postives = 62/126 (49.21%), Query Frame = 2
Query:  152 DLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPI 529
            D  PGE LVR+ Y+ VC +DL  +KG W      P+V GHE +G +V + +G L    +G NV +  L  SC  C +C       C      G++ DG   +Y      ++  +PD LPL  A  +
Sbjct:   21 DPAPGEALVRIAYNSVCGSDLSFYKGVWHGS-TYPVVPGHEWSGTVVDV-NGPLGAELIGTNV-VGDLTVSCGTCAHCTARTPTLCEDLGELGFTRDGACAEYMTIPVGNLRRLPDTLPLRAACQV 143          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: DOIAD_STRLV (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces lividus GN=livE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11
Identity = 49/149 (32.89%), Postives = 73/149 (48.99%), Query Frame = 2
Query:   83 ACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPI 529
            A +F+     +   +D P P      PGE LVR+ Y+ VC +DL  +KG W      P+V GHE +G +V + +G  + L VG +V +  L  SC  C +C EG    C   Q  G++ DG   +Y    A ++  +P G  L  A  +
Sbjct:    3 ALMFEAPERAVLIQRDLPEPA-----PGEALVRLAYNSVCGSDLSFYKGVWHGST-YPVVPGHEWSGTVVDV-NGADSGL-VGVDV-VGDLTCSCGTCRHCAEGKPTLCGDLQELGFTRDGACAEYMTIPAANLHRLPPGTSLRAACQV 142          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11
Identity = 60/222 (27.03%), Postives = 89/222 (40.09%), Query Frame = 2
Query:  158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSG-----YSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            K  EV +++  + VCHTD +   G  P +   P++ GHEGAG + ++G+G +T LK G  V I      C +C+ C       C                S+  C G     Y    TF +Y V     V  I    PL++   + C   T Y A +N +K  PG                     A   R+I +D   DK      +GA + ++ +D S P
Sbjct:   31 KAHEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHEGAGIVESVGEG-VTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKP 249          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11
Identity = 56/228 (24.56%), Postives = 96/228 (42.11%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGL-RVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 775
            EV V++ ++ +CHTD++ W  KG  P  PR   + GHE  G + ++G+G +T+L  G +V +      C +C +C+      C   +             S +S++G          TF +Y V +   V  I    PL++   + C   T   A +N    P                  + A   G  R+I ID   ++ +    +G  +FV+ +DH  P + + A
Sbjct:   36 EVRVKILFTSLCHTDVYFWEAKGQTPVFPR---IFGHEAGGIVESVGEG-VTDLAPGDHV-LPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLA 258          
The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
ADH2_SOLLC1.583e-1125.96Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
TDH_RHIME2.067e-1134.48L-threonine 3-dehydrogenase OS=Rhizobium meliloti ... [more]
ADH2_ORYSJ2.067e-1124.77Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI2.067e-1124.77Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH1_SOLTU2.067e-1125.96Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
XYLB_PSEPU2.700e-1126.32Aryl-alcohol dehydrogenase OS=Pseudomonas putida G... [more]
DOIAD_STRRI2.700e-1134.132-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
DOIAD_STRLV3.526e-1132.892-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
ADHX_HUMAN3.526e-1127.03Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADH1_ORYSJ3.526e-1124.56Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bp
GGGGACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGT
CACAAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGAC
CACAATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGC
TGACCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTAT
GCCACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGT
CTACCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGG
AGACGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAAT
GGCTCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAG
GCTACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTT
CCAACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACG
GATTACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTC
TATCGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCAT
TGTGGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCG
CCATGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAA
CTTTGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTC
GGATCCCGAGAAGTTTATCAAAGCGATCAAGGATATGT
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