FC872123

Overview
NameFC872123
Unique NameFC872123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11
Identity = 56/228 (24.56%), Postives = 96/228 (42.11%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGL-RVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 775
            EV V++ ++ +CHTD++ W  KG  P  PR   + GHE  G + ++G+G +T+L  G +V +      C +C +C+      C   +             S +S++G          TF +Y V +   V  I    PL++   + C   T   A +N    P                  + A   G  R+I ID   ++ +    +G  +FV+ +DH  P + + A
Sbjct:   36 EVRVKILFTSLCHTDVYFWEAKGQTPVFPR---IFGHEAGGIVESVGEG-VTDLAPGDHV-LPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLA 258          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 56/222 (25.23%), Postives = 92/222 (41.44%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            EV V++ Y+ +CHTD++ W  KG  P  PR   + GHE  G + ++G+G +T L  G +V +      C DC +C+      C   +             S ++++G          TF +Y V +   +  I    PL++   + C   T   A LN +K + G                     A   R+I +D    K +    +G   FV+ +DH+ P
Sbjct:   36 EVRVKILYTALCHTDVYFWEAKGQTPVFPR---ILGHEAGGIVESVGEG-VTELVPGDHV-LPVFTGECKDCAHCKSEESNLCDLLRINVDRGVMIGDGQSRFTINGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCVLSCGLSTGLGATLNVAKPKKGSTVAIFGLGAVGLAAMEGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVNPKDHTKP 252          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 56/221 (25.34%), Postives = 92/221 (41.63%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSD 754
            EV +++ ++ +CHTD++ W  KG  P  PR   + GHE  G + ++G+G +T+LK G +V +      C  C +C+      C   +             + +S DG          TF +Y V ++  VT I    PL++   + C   T   A LN +K   G                     A   R+I +D    +      +G  +FV+ +DH D
Sbjct:   38 EVRLKILFTSLCHTDVYFWEAKGQTPLFPR---IFGHEAGGIVESVGEG-VTDLKPGDHV-LPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGD 253          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 56/228 (24.56%), Postives = 96/228 (42.11%), Query Frame = 2
Query:  167 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGL-RVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 775
            EV V++ Y+ +CHTD++ W  KG  P  PR   + GHE  G I ++G+G +T++  G +V +      C +C +C+      C   +             S +S++G          TF +Y V +   V  I    PL++   + C   T   A +N    P                  + A   G  R+I +D    + +    +G  +FV+ +DH+ P + + A
Sbjct:   36 EVRVKILYTSLCHTDVYFWEAKGQTPVFPR---IFGHEAGGIIESVGEG-VTDVAPGDHV-LPVFTGECKECPHCKSAESNMCDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVNPKDHNKPVQEVLA 258          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 61/222 (27.48%), Postives = 88/222 (39.64%), Query Frame = 2
Query:  158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSGYSVD-----GTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVY-RALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            K  EV +++  +GVC +D H   G +  +  LP+V GHE AG + ++G+G +T +K G  V I   A  C  C  C+      C                S+  C G S+       TF +Y V +   V  I    PLE+   I C   T Y  A+  +K  PG                    AA   R+I +D   DK       GA + ++  D   P
Sbjct:   32 KAHEVRIKILATGVCRSDEHVISGAF--RMPLPMVLGHEAAGVVESVGEG-VTCVKPGDKV-IPLFAPQCGKCRACQSPKGNLCTSNDLNSGSGLMPDGTSRFTCKGKSIHHFISTSTFTEYTVVHENSVVKIDPSAPLEKVCLIGCGFSTGYGAAMQTAKVEPGSICAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKEMGATECINPLDFKKP 249          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 61/222 (27.48%), Postives = 89/222 (40.09%), Query Frame = 2
Query:  158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ---AQCSGYSVDGT------------------FQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALL-NSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            K  EV +++  +G+C +D H   G +  K  LP+V GHE AG + ++G+G +T +K G  V I      C  C +CR      C+    +  +G   DGT                  F +Y V +   V  I    PLE+   I C   T Y A +  +K  PG                    AA   R+I +D   DK       GA + V+  D+  P
Sbjct:   32 KAHEVRIKILATGICRSDDHVISGAF--KMPLPMVLGHEAAGVVESVGEG-VTCVKPGDKV-IPLFVPQCGKCSSCRSTRGNLCTSNDLSAATGLMPDGTSRFTCKGKSLHHFISTSSFTEYTVVHENSVVKIDAAAPLEKVCLIGCGFSTGYGAAVETAKVEPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGVDINKDKFPKAKEMGATECVNPLDYKKP 249          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: TDH_RHILW (L-threonine 3-dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=tdh PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.015e-11
Identity = 50/150 (33.33%), Postives = 74/150 (49.33%), Query Frame = 2
Query:  119 FVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKP-RLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRAL 562
            ++++ PVP+   + P +VL+RV  S +C TD+H W  D W  K   +P+V GHE +G I  IG   +T   VG+ V  +     C  C NCR G    C      G +  G+F ++      +V  IP+ +  E AA     G  V+ AL
Sbjct:   18 WMENVPVPE---VGPNDVLIRVRKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFSGEIAEIG-SAVTRYHVGERVSGEGHI-VCGKCRNCRAGRGHLCRNTLGVGVNRPGSFGEFVCIPESNVVAIPEDISDEIAAIFDPFGNAVHTAL 162          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.015e-11
Identity = 55/229 (24.02%), Postives = 96/229 (41.92%), Query Frame = 2
Query:  140 PQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            P QA++    V V++ Y+ +CHTD++ W+      P  P + GHE  G + ++G+G +T+LK G +V +      C +C++C+      C   +             S +S+ G          TF  Y V++   +  I    PL++   + C   T   A LN  K + G                     A   R+I +D   ++ +    +G  +FV+ +DH  P
Sbjct:   32 PPQANV----VRVKILYTSLCHTDVYFWEAK-GQNPLFPRIYGHEAGGIVESVGEG-VTDLKAGDHV-LPVFTGECKECDHCKSEESNMCDLLRINTDRGVMLNDGKSRFSIKGKPIYHFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGISTGLGATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDHKKP 253          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.015e-11
Identity = 62/222 (27.93%), Postives = 90/222 (40.54%), Query Frame = 2
Query:  158 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQA----------------QCSGYSV-----DGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVY-RALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 757
            K  EV +++  +GVC +D H   G       LP V GHEGAG + ++G+G +T +K G  V I   +  C +C  C+      CS++                 C G  +       TF QY V     V  I    PL++   I C   T Y  A+  +K  PG                    AA   R+IA+D   DK       GA + ++ +D+S P
Sbjct:   33 KAHEVRIKMVATGVCRSDDHVVSGTLVTP--LPAVLGHEGAGIVESVGEG-VTCVKPGDKV-IPLFSPQCGECRICKHPESNFCSRSDLLMPRGTLREGTSRFSCKGKQIHNFISTSTFSQYTVVDDIAVAKIDGASPLDKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYSKP 250          
BLAST of FC872123 vs. ExPASy Swiss-Prot
Match: YJJN_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjjN OS=Escherichia coli (strain K12) GN=yjjN PE=3 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 57/197 (28.93%), Postives = 87/197 (44.16%), Query Frame = 2
Query:  125 KDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVG-IKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCAS 712
            K   +P   D    E L+++   G+C TD+HAW G+ P     P V GHE  G IV +G   + +LK GQ V  I ++A  C  C  C+ G    C +    G   DG F +Y      ++ P  DG+  + AA I    ++ + A+  +   PG+                  A A G +V+  DT   +R+  A+
Sbjct:   18 KQREIPIPGD---NEALIKIKSVGICGTDIHAWGGNQPFF-SYPRVLGHEICGEIVGLGK-NIADLKNGQQVAVIPYVA--CQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSVPVANILP-ADGIDPQAAALIEPFAISAH-AVRRAAIAPGE-QVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVAT 204          
The following BLAST results are available for this feature:
BLAST of FC872123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
ADH1_ORYSI3.526e-1124.56Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH3_HORVU4.606e-1125.23Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH1_PETHY4.606e-1125.34Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_PENAM4.606e-1124.56Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_NAJNA4.606e-1127.48Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1A_UROHA4.606e-1127.48Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
TDH_RHILW6.015e-1133.33L-threonine 3-dehydrogenase OS=Rhizobium leguminos... [more]
ADH_FRAAN6.015e-1124.02Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH1_MOUSE6.015e-1127.93Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
YJJN_ECOLI7.856e-1128.93Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872123 ID=FC872123; Name=FC872123; organism=Citrus clementina; type=EST; length=788bp
GGGGACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGT
CACAAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGAC
CACAATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGC
TGACCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTAT
GCCACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGT
CTACCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGG
AGACGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAAT
GGCTCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAG
GCTACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTT
CCAACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACG
GATTACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTC
TATCGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCAT
TGTGGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCG
CCATGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAA
CTTTGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTC
GGATCCCGAGAAGTTTATCAAAGCGATCAAGGATATGT
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