FC872213

Overview
NameFC872213
Unique NameFC872213
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX_PONAB (Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.479e-44
Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 1
Query:  208 YRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENK 702
            Y+  H +QT DFV+    ++G  +  +M++ E  +LL+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL    FGE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GLD VLMSWGHD+YMY V K NK
Sbjct:   44 YKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL--FGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNK 206          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX_BOVIN (Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.208e-43
Identity = 92/192 (47.92%), Postives = 119/192 (61.98%), Query Frame = 1
Query:  130 PETNSFGQTFRDYGVESERQKGVEGFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHK-YFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENK 702
            PE      +FR+Y         V   Y+  H  QT DFV+R   ++G  +   M++ E  ++L+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL     GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL+NVLMSWGHD+YMY + K NK
Sbjct:   19 PEAAKDKDSFRNY-TSGPLLDRVFATYKLMHTWQTVDFVRRKHAQFGGFSYKRMTVMEAVDMLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLALA--GE-PQWAVVGDTFPVGCRPQASVVFRDCTFQDNPDLQDPLYSTELGMYQPHCGLENVLMSWGHDEYMYRMMKFNK 206          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX_PIG (Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.653e-42
Identity = 84/166 (50.60%), Postives = 111/166 (66.87%), Query Frame = 1
Query:  208 YRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENK 702
            Y+  H  QT DFV++   ++G  +   M++ E  ++L+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL+    GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL+N LMSWGHD+YMY + K NK
Sbjct:   41 YKLMHTWQTVDFVRKKHAQFGGFSYKRMTVLEAVDMLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLVLA--GE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPVYSTELGMYQPHCGLENALMSWGHDEYMYQMMKFNK 203          
The following BLAST results are available for this feature:
BLAST of FC872213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX_PONAB8.479e-4453.01Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV... [more]
MIOX_BOVIN4.208e-4347.92Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1[more]
MIOX_PIG4.653e-4250.60Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05701H06SK AbsCOv1 Citrus clementina cDNA clone C05701H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872213 ID=FC872213; Name=FC872213; organism=Citrus clementina; type=EST; length=748bp
CGGCCGGGCTCACACAAGAAGGAGAAGGAGAATCCCTTCCTCTGCAATTG
GCACAGGATGGCTGTTCTCGCTGATTCAAATGACAACGAATTGGAGCAGC
TGCAGGATGGAGGAGAAGGATTCACGGTGCCTGAGACTAATTCGTTTGGT
CAAACTTTCAGGGATTATGGTGTTGAAAGTGAGCGGCAAAAGGGCGTGGA
GGGATTCTATAGAACTCAACATATTAATCAGACCTGTGACTTTGTGAAAA
GGATGAGAGAAGAGTATGGAAAACTGAATAGGGTGGAAATGAGTATATGG
GAATGCTGTGAGCTACTAAATGAATTTGTTGATGAGAGTGATCCCGACCT
TGATGAGCCTCAAATTGAGCACTTGCTGCAGACAGCCGAGGCCATTAGGA
AGGACTATCCTAATGAGGATTGGCTACATTTGACCGGTCTCATCCATGAT
CTTGGAAAGGTTCTTCTTCATCCTGATTTTGGGGAACTTCCTCAGTGGGC
TGTTGTTGGTGACACATTCCCCGTTGGTTGTGCCTTTGATGAATCAATTG
TTCACCACAAGTATTTTAAGGAGAATCCAGACTACAACAATCCTGCTTTT
AACACCAAATATGGAGCTTATTCAGAAGGCCGTGGATTAGACAATGTGTT
GATGTCATGGGGCCATGATGACTACATGTACTTGGTAGCTAAGGAGAATA
AGACACTCTGCCGTCAGCCGGNCTTTTCATAATCAGATACCATTCTTT
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