FC872230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872230 vs. ExPASy Swiss-Prot
Match: ZNT5_HUMAN (Zinc transporter 5 OS=Homo sapiens GN=SLC30A5 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11 Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 1 Query: 1 GVCLHVLADSIRSAGLILASWFLS-LGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQID 411 GV LHVLAD++ S G+I+++ + G A+ LC +++ +F+ V+PL K +LL PP L +I E + FW V G++ +QV V ++ I+Q V G+ D GV +LT+Q++ Sbjct: 591 GVFLHVLADTLGSIGVIVSTVLIEQFGWFIADPLCSLFIAILIFLSVVPLIKDACQVLLLRLPPEY-EKELHIALEKIQKIEGLISYRDPHFWRHSASIVAGTIHIQVTSDVLEQRIVQQVTGILKDAGVNNLTIQVE 727
BLAST of FC872230 vs. ExPASy Swiss-Prot
Match: ZNT5_MOUSE (Zinc transporter 5 OS=Mus musculus GN=Slc30a5 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11 Identity = 45/138 (32.61%), Postives = 72/138 (52.17%), Query Frame = 1 Query: 1 GVCLHVLADSIRSAGLILASWFLS-LGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQID 411 GV LHVLAD++ S G+I+++ + G A+ LC ++V +F+ V+PL K +LL PP L +I E + FW V G++ +QV V ++ I+Q V G+ D GV +LT+Q++ Sbjct: 587 GVFLHVLADTLGSIGVIVSTVLIEQFGWFIADPLCSLFIAVLIFLSVIPLIKDACQVLLLRLPPD-HEKELHIALEKIQKIEGLISYRDPHFWRHSASIVAGTIHIQVTSEVLEQRIVQQVTGILKDAGVNNLTIQVE 723
BLAST of FC872230 vs. ExPASy Swiss-Prot
Match: ZNT5_DANRE (Zinc transporter 5 OS=Danio rerio GN=slc30a5 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11 Identity = 42/138 (30.43%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 1 GVCLHVLADSIRSAGLILASWFL-SLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQID 411 GV LHVLAD++ S G+I+++ + G A+ +C +S +F+ V+PL K +LL PP L+ +I E V FW + G++ LQ+ V ++ ++Q V + D GV +LT+Q++ Sbjct: 601 GVFLHVLADTLGSVGVIISTILIRQFGWLIADPICSLFISTLIFLSVIPLLKDACEVLLLRMPPQ-HEKELNFALEKIQKIEGVLSYRDPHFWRHSASVIAGTIHLQLMSDVVEQRVIQQVSAVLKDAGVNNLTIQLE 737
BLAST of FC872230 vs. ExPASy Swiss-Prot
Match: ZNT5_CHICK (Zinc transporter 5 OS=Gallus gallus GN=SLC30A5 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11 Identity = 45/138 (32.61%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 1 GVCLHVLADSIRSAGLILASWFL-SLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQID 411 GV LHVLAD++ S G+I+++ F+ G A+ LC ++ +F+ V+PL K +LL PP L +I + V FW V G++ +QV V ++ I+Q V + D GV +LTVQ++ Sbjct: 596 GVFLHVLADTLGSVGVIVSTTFIQQFGWLIADPLCSLFIATLIFLSVIPLLKDACQVLLLRIPPE-QEKDLHAALEKIQKIDGVISYRDPHFWCHSASVVAGTIHVQVVSDVMEQRIVQQVTAILKDAGVNNLTVQVE 732 The following BLAST results are available for this feature:
BLAST of FC872230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872230 ID=FC872230; Name=FC872230; organism=Citrus clementina; type=EST; length=638bpback to top |