FC872253 | Citrus Genome Database

Overview


Name	FC872253
Unique Name	FC872253
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	845

Libraries


Library Name	Type
AbsCOv1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.295e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.443 bits (376), Expect = 2.295e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 149.443 bits (376), Expect = 2.295e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.058 bits (375), Expect = 2.997e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 149.058 bits (375), Expect = 2.997e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 6.677e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 147.902 bits (372), Expect = 6.677e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC872253 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.720e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 339
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 8.720e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  340 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 567
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 147.517 bits (371), Expect = 8.720e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  568 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 795
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of FC872253 vs. ExPASy Swiss-Prot

BLAST of FC872253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ARATH	1.030e-35	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	2.295e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	2.997e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	5.112e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	5.112e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	5.112e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	5.112e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	5.112e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	6.677e-35	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	8.720e-35	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	KN0AAB1AD01ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1AD01, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC872253 ID=FC872253; Name=FC872253; organism=Citrus clementina; type=EST; length=845bp
CGGGCCGGGGGCTCGTTCCCTGATTATATTAAACCAATAAAAAAAAAAAG
AAAAAGAAACAAAAAACATACTTAGTTTAGATACCAAGGCTCCCAATCTC
AGCCTTCCAACATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCATC
ACTCTCGAGGTGGAGAGCTCCGACACGATCGACAACGTCAAGGCTAAGAT
CCAGGACAAGGAAGGGATTCCACCGGACCAGCAGCGGCTGATCTTCGCCG
GAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGATTACAACATCCAGAAG
GAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCGGCGGCATGCAGATCTT
CGTCAAGACTCTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCG
ACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCC
CCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCG
CACCCTGGCCGATTATAACATCCAGAAGGAATCCACGCTCCACCTTGTGT
TGCGCCTGAGGGGAGGAATGCAGATCTTCGTCAAGACGTTGACCGGGAAG
ACGATTACCCTGGAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGC
CAAGATCCAGGACAAAGAGGGGATTCCTCCGGACCAGCAGAGGCTCATCT
TCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAACATT
CAAAAGGAGTCCACTCTCCACCTTGTCCTCCGTCTCCGTGGTGGTGACTT
CTAAAAAAATATATGTGGATGTGTCCGCGTTTGATTGGATGGCGC