FC872261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGAL5_ARATH (Beta-galactosidase 5 OS=Arabidopsis thaliana GN=BGAL5 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.090e-28 Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 30 KLPMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWPXXXXXXXXXXXXXXXTYTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISLLKRT 362 K P+TWYK F P GN+PLAL++ +MGKG WINGQSIGR W TY + KC++ G+P+Q WYHVPRSWLKP GNLLV+FE+ GG+ +S++KR+ Sbjct: 621 KQPLTWYKAYFDAPRGNEPLALDLKSMGKGQAWINGQSIGRYW-MAFAKGDCGSCNYAGTYRQNKCQSGCGEPTQRWYHVPRSWLKPKGNLLVLFEELGGDISKVSVVKRS 730
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGAL4_ORYSJ (Beta-galactosidase 4 OS=Oryza sativa subsp. japonica GN=Os02g0219200 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.190e-27 Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 3 Query: 36 PMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWPXXXXXXXXXXXXXXXTYTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISLLKRTT 365 P+TW+K F P GNDP+AL+MG+MGKG +W+NG +GR W TY E KCR+ G SQ WYHVPRSWLKP GNLLVV E++GG+ +SL RTT Sbjct: 621 PLTWHKAFFNAPAGNDPVALDMGSMGKGQLWVNGHHVGRYWSYKASGGCGGCSYAG-TYHEDKCRSNCGDLSQRWYHVPRSWLKPGGNLLVVLEEYGGDLAGVSLATRTT 729
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGAL4_ORYSI (Beta-galactosidase 4 OS=Oryza sativa subsp. indica GN=OsI_006270 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.190e-27 Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 3 Query: 36 PMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWPXXXXXXXXXXXXXXXTYTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISLLKRTT 365 P+TW+K F P GNDP+AL+MG+MGKG +W+NG +GR W TY E KCR+ G SQ WYHVPRSWLKP GNLLVV E++GG+ +SL RTT Sbjct: 621 PLTWHKAFFNAPAGNDPVALDMGSMGKGQLWVNGHHVGRYWSYKASGGCGGCSYAG-TYHEDKCRSNCGDLSQRWYHVPRSWLKPGGNLLVVLEEYGGDLAGVSLATRTT 729
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGAL5_ORYSJ (Beta-galactosidase 5 OS=Oryza sativa subsp. japonica GN=Os03g0165400 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.316e-26 Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 36 PMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWPXXXXXXXXXXXXXXXTYTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISLLKRT 362 P+ WY+ F P G++PLAL+MG+MGKG +WINGQSIGR W +Y KC+ G+P+Q WYHVPRSWL+P+ NLLVVFE+ GG+ I+L KRT Sbjct: 618 PLAWYRAYFDTPSGDEPLALDMGSMGKGQIWINGQSIGRYWTAYAEGDCKGCHYTG-SYRAPKCQAGCGQPTQRWYHVPRSWLQPTRNLLVVFEELGGDSSKIALAKRT 725
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGAL8_ARATH (Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.244e-26 Identity = 57/117 (48.72%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 21 LALKLPMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWPXXXXXXXXXXXXXXX--TYTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISLLKRTT 365 L K P+ WYKTTF P G++P+A++ GKG+ W+NGQSIGR WP +Y KC GKPSQ YHVPRSWLKPSGN+LV+FE+ GG+P IS + T Sbjct: 621 LPTKQPLIWYKTTFDAPSGSEPVAIDFTGTGKGIAWVNGQSIGRYWPTSIAGNGGCTESCDYRGSYRANKCLKNCGKPSQTLYHVPRSWLKPSGNILVLFEEMGGDPTQISFATKQT 737
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGAL3_ORYSJ (Beta-galactosidase 3 OS=Oryza sativa subsp. japonica GN=Os01g0875500 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.931e-26 Identity = 54/111 (48.65%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 36 PMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWPXXXXXXXXXXXXXXX--TYTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISLLKRT 362 PMTWYK VP G+DP+ L+M +MGKG+ W+NG +IGR WP T++ KCR G+P+Q WYHVPRSW PSGN LV+FE+ GG+P I+ +RT Sbjct: 627 PMTWYKVNVDVPQGDDPVGLDMQSMGKGLAWLNGNAIGRYWPRISPVSDRCTSSCDYRGTFSPNKCRRGCGQPTQRWYHVPRSWFHPSGNTLVIFEEKGGDPTKITFSRRT 737
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGA15_ORYSJ (Beta-galactosidase 15 OS=Oryza sativa subsp. japonica GN=Os12g0429200 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.455e-25 Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 36 PMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWPXXXXXXXXXXXXXXX-TYTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISL 350 P TWYKT F P G DP+A+++G+MGKG W+NG IGR W Y E+KC++ G P+Q WYH+PR WLK S NLLV+FE+ GG+P ISL Sbjct: 683 PFTWYKTMFSTPKGTDPVAIDLGSMGKGQAWVNGHLIGRYWSLVAPESGCSSSCYYPGAYNERKCQSNCGMPTQNWYHIPREWLKESDNLLVLFEETGGDPSLISL 788
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGAL9_ORYSJ (Beta-galactosidase 9 OS=Oryza sativa subsp. japonica GN=Os06g0573600 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.481e-25 Identity = 53/112 (47.32%), Postives = 71/112 (63.39%), Query Frame = 3 Query: 30 KLPMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWPXXXXXXXXXXXXXXXTYTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISLLKRTT 365 K P+TW++ F P G P+AL++G+MGKG W+NG IGR W TY+EKKC+ G SQ WYHVPRSWL PSGNL+V+ E++GG+ ++L+ RTT Sbjct: 605 KQPVTWHRAYFNAPAGGAPVALDLGSMGKGQAWVNGHLIGRYWSYKASGNCGGCSYAG-TYSEKKCQANCGDASQRWYHVPRSWLNPSGNLVVLLEEFGGDLSGVTLMTRTT 715
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGA10_ARATH (Beta-galactosidase 10 OS=Arabidopsis thaliana GN=BGAL10 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.042e-23 Identity = 54/115 (46.96%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 30 KLPMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWPXXXXXXXXXXXXXXXT-----YTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISLLKR 359 K P+TWYK P G++P+ L+M +MGKGM W+NG+ IGR WP + KC T G+PSQ WYHVPRSW K SGN LV+FE+ GG P I L KR Sbjct: 622 KQPLTWYKVVIEPPSGSEPVGLDMISMGKGMAWLNGEEIGRYWPRIARKNSPNDECVKECDYRGKFMPDKCLTGCGEPSQRWYHVPRSWFKSSGNELVIFEEKGGNPMKIKLSKR 736
BLAST of FC872261 vs. ExPASy Swiss-Prot
Match: BGAL6_ORYSJ (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica GN=Os03g0255100 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.033e-23 Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 36 PMTWYKTTFIVPPGNDPLALNMGAMGKGMVWINGQSIGRRWP--XXXXXXXXXXXXXXXTYTEKKCRTYWGKPSQPWYHVPRSWLKPSGNLLVVFEKWGGEPHWISLLKRTT 365 P+ WYKT F P G+DP+A++ MGKG W+NGQSIGR WP Y+ KC G+PSQ YHVPRS+L+P N LV+FE++GG+P IS R T Sbjct: 635 PLIWYKTKFTAPAGDDPVAIDFTGMGKGEAWVNGQSIGRYWPTNLAPQSGCVNSCNYRGAYSSNKCLKKCGQPSQTLYHVPRSFLQPGSNDLVLFEQFGGDPSMISFTTRQT 746 The following BLAST results are available for this feature:
BLAST of FC872261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872261 ID=FC872261; Name=FC872261; organism=Citrus clementina; type=EST; length=783bpback to top |