FC872292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.050e-33 Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 3 Query: 3 VLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 314 V+SFKSAIWFWMT Q PKPSCH+VI W+PS + A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PG+NLDC NQR +G L+ M Sbjct: 219 VISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33 Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 3 Query: 3 VLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMA 305 V+SFK+A+WFWMT Q PKPSCH+VI +W PS+ ++ AGR+PGYG+ TNIINGG+ECG G +D V NRIGF+ +C GI G NLDCY+QRP+ L A Sbjct: 232 VVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33 Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 3 Query: 6 LSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 287 +SFK+A WFWMT Q PKPSCH VI +W PSA + AGR+PGYG TNIINGG+ECG G +D V +RIGF+ +C G+ GDNLDCYNQRPY Sbjct: 224 VSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33 Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 3 Query: 6 LSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 314 +SFKSA WFWMT Q PKPSCH VII W PS+ + AGR+PGYG+ TNIINGG+ECG+G N V +RIGF+ +C G+ G+NLDCYNQ P+G + SM Sbjct: 222 ISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.056e-33 Identity = 59/104 (56.73%), Postives = 80/104 (76.92%), Query Frame = 3 Query: 3 VLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 314 V+SFK+A+WFWMT Q PKPSCH+VII W PS+ + A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+ +C G+ PGDNLDC NQR +G L+ ++ Sbjct: 225 VISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 5.213e-33 Identity = 63/100 (63.00%), Postives = 73/100 (73.00%), Query Frame = 3 Query: 3 VLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNL 299 V+SFK+AIWFWM Q PKPSCH VI W PSA ++ AGR+PGYG+ TNIINGGIECGQGG N A +RIGF+ +C G G NLDCY QRP+G L Sbjct: 234 VISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.213e-33 Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 3 Query: 6 LSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 314 +SFKSA WFWMT Q PKPSCH+VII W PS + AGR+PG+GL TNIINGG+ECGQG N V +RIGF+ +C G+ G+NLDCYNQR Y SM Sbjct: 219 ISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 6.808e-33 Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = 3 Query: 3 VLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM*SS 323 V+SFKSA+WFWMTAQ PKPS H+VI W PS+ +V A RLPGYG TNIINGG+ECG+G + V++RIGFF +C G+ G+NLDCY+Q P+G +L+ + +S Sbjct: 221 VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.891e-33 Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 6 LSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 290 +SFK+AIWFWMT Q KPS H+VII W PSA + A R+PGYG+ TNIINGGIECG G NDAV +RIG++ +CG + PG+NLDCYNQR +G Sbjct: 157 ISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of FC872292 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.161e-32 Identity = 61/107 (57.01%), Postives = 79/107 (73.83%), Query Frame = 3 Query: 3 VLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM*SS 323 V+SFKSA+WFWMTAQ PKPS H+VI W PS+ +V A RLPGYG TNIINGG+ECG+G + V++RIGFF +C G+ G+NLDCY+Q P+G +L + +S Sbjct: 220 VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326 The following BLAST results are available for this feature:
BLAST of FC872292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872292 ID=FC872292; Name=FC872292; organism=Citrus clementina; type=EST; length=509bpback to top |