FC872306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYYC_CHICK (Tyrosyl-tRNA synthetase, cytoplasmic OS=Gallus gallus GN=YARS PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.826e-26 Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFN 447 GG+DQR + A +Y + K I L + M+PGL KMS S+ S I + D + +V K+KKA+C P +E N L +IK+++FP +FV+ R E GGNKT+ +YE L D+ E +HPGDLK S+ A+NK+L P+R FN Sbjct: 184 GGVDQRKIFTFAEKYLPSLGYA-KRIHLMNPMVPGLTGS--KMSSSEEDSKIDLLDRKEDVKKKLKKAFCEPGNIENNGVLSFIKHVLFPLKSEFVILREEKWGGNKTYTAYETLEKDFAEQVVHPGDLKNSVEAALNKLLDPIREKFN 329
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_SULIY (Tyrosyl-tRNA synthetase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=tyrS PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.385e-26 Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE----------------KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRV 483 GG DQR ++LAR+ + + +K K + + +L GLQ GQ KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER GG+ F+ YEEL Y EG +HP DLK + ++ +N+IL+P+R + +++++++ Sbjct: 180 GGTDQRKAHMLARDVAEKMGKK-KIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMIQKI 355
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_SULIN (Tyrosyl-tRNA synthetase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=tyrS PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.385e-26 Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE----------------KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRV 483 GG DQR ++LAR+ + + +K K + + +L GLQ GQ KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER GG+ F+ YEEL Y EG +HP DLK + ++ +N+IL+P+R + +++++++ Sbjct: 180 GGTDQRKAHMLARDVAEKMGKK-KIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMIQKI 355
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_SULIM (Tyrosyl-tRNA synthetase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=tyrS PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.385e-26 Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE----------------KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRV 483 GG DQR ++LAR+ + + +K K + + +L GLQ GQ KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER GG+ F+ YEEL Y EG +HP DLK + ++ +N+IL+P+R + +++++++ Sbjct: 180 GGTDQRKAHMLARDVAEKMGKK-KIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMIQKI 355
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_SULIL (Tyrosyl-tRNA synthetase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=tyrS PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.385e-26 Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE----------------KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRV 483 GG DQR ++LAR+ + + +K K + + +L GLQ GQ KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER GG+ F+ YEEL Y EG +HP DLK + ++ +N+IL+P+R + +++++++ Sbjct: 180 GGTDQRKAHMLARDVAEKMGKK-KIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMIQKI 355
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_SULIK (Tyrosyl-tRNA synthetase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=tyrS PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.385e-26 Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE----------------KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRV 483 GG DQR ++LAR+ + + +K K + + +L GLQ GQ KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER GG+ F+ YEEL Y EG +HP DLK + ++ +N+IL+P+R + +++++++ Sbjct: 180 GGTDQRKAHMLARDVAEKMGKK-KIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMIQKI 355
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_SULIA (Tyrosyl-tRNA synthetase OS=Sulfolobus islandicus (strain M.16.27) GN=tyrS PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.385e-26 Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE----------------KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRV 483 GG DQR ++LAR+ + + +K K + + +L GLQ GQ KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER GG+ F+ YEEL Y EG +HP DLK + ++ +N+IL+P+R + +++++++ Sbjct: 180 GGTDQRKAHMLARDVAEKMGKK-KIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIKMSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMIQKI 355
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_PYRAB (Tyrosyl-tRNA synthetase OS=Pyrococcus abyssi GN=tyrS PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.115e-26 Identity = 65/186 (34.95%), Postives = 107/186 (57.53%), Query Frame = 1 Query: 4 GMDQRILNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ----------------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDK-KFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRVK 486 GMDQR +V+A E +K K KP+ + HH+L GLQ+ Q KMSKS P SA+++ D E+ K++KA+CP + V NP L++ ++IIF + +F + R GG+ T+ ++EEL D+ EG LHP DLK ++++ + ++L+P+R +F ++ +L++ VK Sbjct: 187 GMDQRKAHVIAIEVAQKLKYHPIVHNGEKLKPVAVHHHLLLGLQEPPVWPITSEEQFKEIKAQMKMSKSKPYSAVFIHDSPEEIKQKLRKAFCPAREVNYNPVLDWAEHIIFREEPTEFTIHRPAKFGGDVTYTTFEELKKDFAEGKLHPLDLKNAVAEYLIELLKPIREYFERHPEPLELMRSVK 372
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_HALMA (Tyrosyl-tRNA synthetase OS=Haloarcula marismortui GN=tyrS PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26 Identity = 67/149 (44.97%), Postives = 94/149 (63.09%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPW----DKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVR 435 GG+DQR + +L+RE D ++ PI L +L GL G KMS SD +S + + D EV+ KI +AYCP VE N LEY+++++FP FVVER E GG+ T+ESY+E+ +D+ G LHP DLKPS + AI+ ++ PVR Sbjct: 180 GGVDQRGIYMLSREILPDHGGES-PICLFAPLLSGLSGG--KMSASDEASKVNLTDSPDEVDEKINQAYCPAGEVEENGVLEYLQHLVFPVLDVRGDSFVVERPEEYGGDLTYESYDEVESDFVSGELHPADLKPSAASAISDVIDPVR 325
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_PYRIL (Tyrosyl-tRNA synthetase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tyrS PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26 Identity = 71/188 (37.77%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIK--------RKNKPIILSHHMLPGL----------QQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKK--FVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRVKGYRVTR 504 GG+DQR ++LAR+ D I+ ++ KP+ L H +LP L + + KMSKS P SAI++ D E+ KI KAYCPP+ E NP LE ++ F +K V++R GG+ SYEEL A Y +G +HP DLK + S+A+ +L+PV +F LL+ +K +TR Sbjct: 187 GGIDQRRAHILARQVADKIRFYPLKVDGKRIKPVALHHKLLPALNITSKPSSREELSEMKMSKSIPQSAIFVHDSPDEIRQKIAKAYCPPRDTEYNPVLELLRISAFREKRKTPLVIKRPAQYGGDLEVWSYEELEALYRDGRVHPADLKTATSEALITLLEPVYRYF--QGPGAKLLEEMKNITITR 372 The following BLAST results are available for this feature:
BLAST of FC872306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872306 ID=FC872306; Name=FC872306; organism=Citrus clementina; type=EST; length=692bpback to top |