FC872512

Overview
NameFC872512
Unique NameFC872512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCA_RICCN (ADP,ATP carrier protein 1 OS=Rickettsia conorii GN=tlcA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.486e-20
Identity = 49/107 (45.79%), Postives = 68/107 (63.55%), Query Frame = 1
Query:   28 PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGS--LANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 342
            PL  AV +G +QN+ SK  KYS FD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +     +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  386 PLALAVMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFILFPAFGFVEATPYFASIFFVIVILWIYAVKGLNKEYKVL 492          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLC2_CHLPN (ADP,ATP carrier protein 2 OS=Chlamydia pneumoniae GN=tlcB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.327e-18
Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 1
Query:   19 GMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 333
            GMTPL  A + G MQN+ S+  K++ FD  KEMA+IPL  + K  GKAAID V + +GKSGG+LI Q +++ F S+A S   +  +LL+I++ W+     +  ++
Sbjct:  399 GMTPLALAAWTGGMQNVLSRGTKFTFFDQTKEMAFIPLSPEDKNHGKAAIDGVVSRIGKSGGSLIYQGLLVIFSSVAASLNVIALVLLIIMVVWIAVVAYIGKEY 503          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCD_RICCN (ADP,ATP carrier protein 4 OS=Rickettsia conorii GN=tlcD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-18
Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = 1
Query:    7 LAKFGMT-PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 333
            +A F +T P + A+ +GA+QN+ SK +KY+ FD  KEMAY+PLD + K+KGKAA DV+   LGKSG A +Q   F+IL   S  + +  L  I ++  L WL A ++L+ ++
Sbjct:  392 IANFILTDPALIAITIGAIQNVLSKSSKYTLFDSTKEMAYVPLDPEIKIKGKAAADVIGTKLGKSGSAFLQSLVFIILPSASYQSISTCLMIIFIITCLTWLWATKALNKEY 503          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCD_RICFE (ADP,ATP carrier protein 4 OS=Rickettsia felis GN=tlcD PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1
Query:    7 LAKFGMT-PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 333
            +A F +T P + A+ +GA+QN+ SK +KY+ FD  KEMAY+PLD + K+KGKAA DV+   LGKSG A +Q   F+IL   S  + +  L  I ++  L WL A + L+ ++
Sbjct:  392 IANFILTDPALIAITIGAIQNVLSKSSKYTLFDSTKEMAYVPLDPEIKIKGKAAADVIGTKLGKSGSAFLQSLVFIILPSASYQSISICLMIIFIITCLTWLWATKELNKEY 503          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLC2_CHLTR (ADP,ATP carrier protein 2 OS=Chlamydia trachomatis GN=tlcB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 46/110 (41.82%), Postives = 73/110 (66.36%), Query Frame = 1
Query:   19 GMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILL------VIVLAWLGAARSLDTQ 330
            G++PL+   ++G +QN+FS+  K++ FD  KEMA+IPL++D K  GKAAID V + +GKSGG+L+ Q +++ F S+A S   +  +LL      + V+AWLG   +  T+
Sbjct:  396 GISPLVLTAWLGGVQNVFSRAIKFTYFDQTKEMAFIPLEDDEKNYGKAAIDGVISRVGKSGGSLVYQGLLIIFSSVAASLNAITIVLLLALGSWIFVIAWLGREYTAKTE 505          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCD_RICBR (ADP,ATP carrier protein 4 OS=Rickettsia bellii (strain RML369-C) GN=tlcD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 1
Query:    7 LAKFGMT-PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 333
            +A F +T P + A+ +GA+QN+ SK +KY+ FD  KEMAY+PLD++ K+KGKAA DV+   LGKSG A +Q   F+IL   S  + +  L  I ++  L W  A + L+ ++
Sbjct:  401 VASFILTDPALIAITIGAIQNVLSKSSKYTLFDSTKEMAYVPLDKEIKIKGKAAADVLGTKLGKSGSAFLQSLVFIILPSASYQSISVCLMFIFIITCLIWFWAVKELNKEY 512          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLC2_CHLMU (ADP,ATP carrier protein 2 OS=Chlamydia muridarum GN=tlcB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   19 GMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILL------VIVLAWLGAARSLDT 327
            G +PL+   ++G +QN+FS+  K++ FD  KEMA+IPL++D K  GKAAID V + +GKSGG+L+ Q +++ F S+A+    +  +LL      + V+AWLG   S+ T
Sbjct:  396 GFSPLVLTAWLGGVQNVFSRAIKFTYFDQTKEMAFIPLEDDEKDYGKAAIDGVISRVGKSGGSLVYQALLIIFSSVADCMNAITIVLLLALGGWIWVVAWLGKEYSVRT 504          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCD_RICTY (ADP,ATP carrier protein 4 OS=Rickettsia typhi GN=tlcD PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16
Identity = 46/112 (41.07%), Postives = 71/112 (63.39%), Query Frame = 1
Query:    7 LAKFGMT-PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 333
            +A F +T P + A+ +GA+QN+ SK +KY+ FD  KEMAY+PL+ + K+ GKAA DV+   LGKSG A +Q   F+IL   S  + +  L  I ++  L W+ A + L+ ++
Sbjct:  392 IANFILTDPALVAITIGAIQNVLSKSSKYTLFDSTKEMAYVPLEPEIKISGKAAADVIGTKLGKSGSAFLQSLIFIILPSSSYQSISICLMIIFILTCLTWIWATKELNKEY 503          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCD_RICPR (ADP,ATP carrier protein 4 OS=Rickettsia prowazekii GN=tlcD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16
Identity = 45/112 (40.18%), Postives = 71/112 (63.39%), Query Frame = 1
Query:    7 LAKFGMT-PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 333
            +A F +T P + A+ +GA+QN+ SK +KY+ FD  KEMAY+PL+ + K+ GKAA DV+   LGKSG A +Q   F+IL   S  + +  L  I ++  + W+ A + L+ ++
Sbjct:  392 IANFILTDPALVAITIGAIQNVLSKSSKYTLFDSTKEMAYVPLEPEIKISGKAAADVIGTKLGKSGSAFLQSLIFIILPSASYQSISICLMIIFILTCVTWIWATKELNKEY 503          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCE_RICBR (ADP,ATP carrier protein 5 OS=Rickettsia bellii (strain RML369-C) GN=tlcE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.852e-16
Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 1
Query:   22 MTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSL 321
            M+PL  AV +G +QNI +K  KYS +D  +EM YIPLD++ K KGKAA+DV+   +GKS   L+Q   F I+   +  + +P L  +   + LAW+ A R +
Sbjct:  391 MSPLALAVSIGGIQNILAKGTKYSIWDTSREMLYIPLDQELKTKGKAAVDVISAKVGKSSSGLVQSIIFTIIPTATFTSISPVLMVVFTFVCLAWIYAVRKI 492          
The following BLAST results are available for this feature:
BLAST of FC872512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
TLCA_RICCN2.486e-2045.79ADP,ATP carrier protein 1 OS=Rickettsia conorii GN... [more]
TLC2_CHLPN2.327e-1842.86ADP,ATP carrier protein 2 OS=Chlamydia pneumoniae ... [more]
TLCD_RICCN3.039e-1843.75ADP,ATP carrier protein 4 OS=Rickettsia conorii GN... [more]
TLCD_RICFE6.770e-1843.75ADP,ATP carrier protein 4 OS=Rickettsia felis GN=t... [more]
TLC2_CHLTR6.770e-1841.82ADP,ATP carrier protein 2 OS=Chlamydia trachomatis... [more]
TLCD_RICBR1.970e-1742.86ADP,ATP carrier protein 4 OS=Rickettsia bellii (st... [more]
TLC2_CHLMU1.970e-1742.20ADP,ATP carrier protein 2 OS=Chlamydia muridarum G... [more]
TLCD_RICTY1.668e-1641.07ADP,ATP carrier protein 4 OS=Rickettsia typhi GN=t... [more]
TLCD_RICPR3.715e-1640.18ADP,ATP carrier protein 4 OS=Rickettsia prowazekii... [more]
TLCE_RICBR4.852e-1642.16ADP,ATP carrier protein 5 OS=Rickettsia bellii (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AG11ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3AG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872512 ID=FC872512; Name=FC872512; organism=Citrus clementina; type=EST; length=797bp
GGGGCTCTTGCGAAGTTCGGAATGACTCCTCTTATTGCTGCTGTATATGT
GGGTGCCATGCAAAATATTTTCAGTAAGTGTGCCAAGTACAGCTAGTTTG
ATCCTCGCAAAGAAATGGCCTACATTCCATTAGATGAAGACACCAAGGTT
AAAGGGAAGGCAGCCATCGATGTTGTGTGCAACCCGTTGGGGAAATCTGG
AGGTGCTCTTATTCAGCAGTTTATGATATTAACCTTTGGGTCCCTTGCGA
ATTCAACTCCTTATCTTGGAGGGATACTTTTGGTGATTGTTCTTGCATGG
TTAGGAGCAGCCAGGTCTTTAGATACCCAATTTACAGCTTTGCGTCAGGA
AGAAGAGCTTGAGAAGGAGATGGAAAGAGCTGCTGTTAAGATCCCAGTTG
TCTCTGAAAATGAAGGCGGGAATGGTACTCTTCCAGGTGGATCAGCTTTG
AATGCAGCAGGTGAGACACCCAGTGAAGCATCTAGTCCACGCAATATCTG
AAATAGTTTCTTCCAATTCCTTGCCGCATGAAGAATGAGAAGCATCAATA
CTTGAGGTATTGCTTGTAGGATCTTCTCAAATTACACAAATAATAGTAGC
TAAACAAAGTATGAGCCCGTCTGTCTTAATTCCGCCTTTTTCCCGTAGAT
AATGAGTTTAGTATCTGTTTACTCATACATTCATGTTCTTTGTAGAATTC
GAATTTGGTTTTTTATTGATAGCAACAACATTAAATTTAATAATTTCTTG
ATTATATCTTAGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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