FC872512

Overview
NameFC872512
Unique NameFC872512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCE_RICFE (ADP,ATP carrier protein 5 OS=Rickettsia felis GN=tlcE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.081e-15
Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = 1
Query:   22 MTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSL 321
            M+PL  AV +G +QNI +K  KYS +D  +EM YIPLD++ K KGKAA+DV+   +GKS   L+Q   F ++   +  + +P L  +   + LAW+ A R +
Sbjct:  390 MSPLALAVSIGGIQNILAKGTKYSIWDTSREMLYIPLDDELKTKGKAAVDVISAKVGKSSSGLVQSIIFTLVPTATFTSISPILMVVFTFVCLAWIYAVRKI 491          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCE_RICCN (ADP,ATP carrier protein 5 OS=Rickettsia conorii GN=tlcE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.081e-15
Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 1
Query:   22 MTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 333
            M+PL  AV +G +QNI +K  KYS +D  +EM YIPLDE+ K KGKAA+DV+   +GKS   L+Q   F ++   +    +P L  +   + LAW+ A R +  ++
Sbjct:  390 MSPLALAVSIGGIQNILAKGTKYSIWDTSREMLYIPLDEELKTKGKAAVDVISAKVGKSSSGLVQSIIFTLVPTATFTLISPILMVVFTFVCLAWIYAVRKIYCEY 495          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCC_RICBR (ADP,ATP carrier protein 3 OS=Rickettsia bellii (strain RML369-C) GN=tlcC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.081e-15
Identity = 47/106 (44.34%), Postives = 66/106 (62.26%), Query Frame = 1
Query:   31 LIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 342
            L AA+ VGA+QNI SK +KYS FD  KEMAYIPL  + + KGKAA++V+    GKS GA IQ   F+I+   +  +   YL  I +V++  W+     L+ ++T L
Sbjct:  397 LYAAIIVGAIQNILSKSSKYSLFDSTKEMAYIPLSLELRTKGKAAVEVIGTKFGKSLGAFIQSLIFIIIPTATFDSIIIYLLVIFIVMISLWIWDVVKLNKEYTEL 502          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCE_RICTY (ADP,ATP carrier protein 5 OS=Rickettsia typhi GN=tlcE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.145e-15
Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 1
Query:   22 MTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSL 321
            M+PL  AV +G +QNI +K  KYS +D  +EM YIPLD++ K KGKAA+DV+   +GKS   L+Q   F ++   +  + +P L  +   +  AW+ A R +
Sbjct:  391 MSPLALAVSIGGIQNILAKGTKYSIWDTSREMLYIPLDDELKTKGKAAVDVISAKIGKSSSGLVQSIIFTLVPNATFTSISPILMVVFTFVCFAWIYAVRKI 492          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCE_RICPR (ADP,ATP carrier protein 5 OS=Rickettsia prowazekii GN=tlcE PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15
Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 1
Query:   22 MTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSL 321
            M+PL  AV +G +QNI +K  KYS +D  +EM YIPLD++ K KGKAA+DV+   +GKS   L+Q   F ++   +  + +P L  +   +  AW+ A R +
Sbjct:  391 MSPLALAVSIGGIQNILAKGTKYSIWDTSREMLYIPLDDELKTKGKAAVDVISAKVGKSSSGLVQSIIFTLVPNATFTSISPILMVVFTFVCFAWIYAVRKI 492          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCC_RICFE (ADP,ATP carrier protein 3 OS=Rickettsia felis GN=tlcC PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 1
Query:   31 LIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 342
            L AA+ VGA+QNI SK +KYS FD  KEMAYIPL  + + KGKAA++V+    GKS GA IQ   F+I+   +  +   YL  I +V++  W+     L+ ++  L
Sbjct:  394 LYAAIIVGAIQNILSKSSKYSLFDSTKEMAYIPLSLELRTKGKAAVEVIGTKFGKSLGAFIQSLIFIIIPTATFDSIIIYLLVIFIVMMSLWIWNVIKLNKEYIEL 499          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCB_RICFE (ADP,ATP carrier protein 2 OS=Rickettsia felis GN=tlcB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 1
Query:   28 PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILL----VIVLAWLGAARSLDTQFTAL 342
            PL+  V++G + ++ SK  KYS FD  KEM YIPLD + K KGKAA+DV+   +GKS GA+IQ      F +  ++   + G+L+    ++ L WL   + L  Q+  +
Sbjct:  398 PLVVIVFIGGLWHVLSKSVKYSLFDATKEMVYIPLDSEMKTKGKAAVDVMGTKIGKSIGAIIQFISFSIFPNAVHND--IAGLLMFSFVIVCLLWLYGVKVLSEQYNKM 504          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCC_RICPR (ADP,ATP carrier protein 3 OS=Rickettsia prowazekii GN=tlcC PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 1
Query:   31 LIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQ 348
            L  A+ VGA+QNI SK +KYS FD  KEMAYIPL  + + KGKAA++V+    GKS GA IQ   F+I+   +  +   YL  I +V++  W+     L+ ++  L Q
Sbjct:  394 LYVAIIVGAIQNILSKSSKYSLFDSTKEMAYIPLSLELRTKGKAAVEVIGTKFGKSLGAFIQSLIFIIIPTATFDSIIIYLLVIFIVMMNLWIWNIIKLNKEYIKLCQ 501          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCB_RICBR (ADP,ATP carrier protein 2 OS=Rickettsia bellii (strain RML369-C) GN=tlcB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 1
Query:   25 TPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGIL----LVIVLAWLGAARSLDTQFTAL 342
            +PLI  V++G + ++ SK  KYS FD  KEM YIPLD + K KGKAA+DV+   +GKS GA+IQ      F +  ++   + G+L    +++ L WL   + L   +  L
Sbjct:  397 SPLIVIVFIGGLWHVLSKSVKYSLFDATKEMVYIPLDSEMKTKGKAAVDVMGTKIGKSIGAIIQFISFSIFPNAVHND--IAGLLMFSFIIVCLIWLYGVKVLAEYYNKL 504          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCC_RICCN (ADP,ATP carrier protein 3 OS=Rickettsia conorii GN=tlcC PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1
Query:   31 LIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 342
            L AA+ VGA+QNI SK +KYS FD  KEMAYIPL  + + KGKAA++V+    GKS GA IQ   F+I+   +  +   YL    +V++  W+     L+ ++  L
Sbjct:  394 LYAAIIVGAIQNILSKSSKYSLFDSTKEMAYIPLSLELRTKGKAAVEVIGTKFGKSLGAFIQSLIFIIIPTATFDSIIIYLLITFIVMMSLWIWNVIKLNKEYVEL 499          
The following BLAST results are available for this feature:
BLAST of FC872512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
TLCE_RICFE1.081e-1541.18ADP,ATP carrier protein 5 OS=Rickettsia felis GN=t... [more]
TLCE_RICCN1.081e-1540.57ADP,ATP carrier protein 5 OS=Rickettsia conorii GN... [more]
TLCC_RICBR1.081e-1544.34ADP,ATP carrier protein 3 OS=Rickettsia bellii (st... [more]
TLCE_RICTY3.145e-1540.20ADP,ATP carrier protein 5 OS=Rickettsia typhi GN=t... [more]
TLCE_RICPR4.108e-1540.20ADP,ATP carrier protein 5 OS=Rickettsia prowazekii... [more]
TLCC_RICFE9.151e-1543.40ADP,ATP carrier protein 3 OS=Rickettsia felis GN=t... [more]
TLCB_RICFE9.151e-1538.53ADP,ATP carrier protein 2 OS=Rickettsia felis GN=t... [more]
TLCC_RICPR2.662e-1442.59ADP,ATP carrier protein 3 OS=Rickettsia prowazekii... [more]
TLCB_RICBR2.662e-1439.09ADP,ATP carrier protein 2 OS=Rickettsia bellii (st... [more]
TLCC_RICCN3.477e-1442.45ADP,ATP carrier protein 3 OS=Rickettsia conorii GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AG11ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3AG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872512 ID=FC872512; Name=FC872512; organism=Citrus clementina; type=EST; length=797bp
GGGGCTCTTGCGAAGTTCGGAATGACTCCTCTTATTGCTGCTGTATATGT
GGGTGCCATGCAAAATATTTTCAGTAAGTGTGCCAAGTACAGCTAGTTTG
ATCCTCGCAAAGAAATGGCCTACATTCCATTAGATGAAGACACCAAGGTT
AAAGGGAAGGCAGCCATCGATGTTGTGTGCAACCCGTTGGGGAAATCTGG
AGGTGCTCTTATTCAGCAGTTTATGATATTAACCTTTGGGTCCCTTGCGA
ATTCAACTCCTTATCTTGGAGGGATACTTTTGGTGATTGTTCTTGCATGG
TTAGGAGCAGCCAGGTCTTTAGATACCCAATTTACAGCTTTGCGTCAGGA
AGAAGAGCTTGAGAAGGAGATGGAAAGAGCTGCTGTTAAGATCCCAGTTG
TCTCTGAAAATGAAGGCGGGAATGGTACTCTTCCAGGTGGATCAGCTTTG
AATGCAGCAGGTGAGACACCCAGTGAAGCATCTAGTCCACGCAATATCTG
AAATAGTTTCTTCCAATTCCTTGCCGCATGAAGAATGAGAAGCATCAATA
CTTGAGGTATTGCTTGTAGGATCTTCTCAAATTACACAAATAATAGTAGC
TAAACAAAGTATGAGCCCGTCTGTCTTAATTCCGCCTTTTTCCCGTAGAT
AATGAGTTTAGTATCTGTTTACTCATACATTCATGTTCTTTGTAGAATTC
GAATTTGGTTTTTTATTGATAGCAACAACATTAAATTTAATAATTTCTTG
ATTATATCTTAGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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