FC872520

Overview
NameFC872520
Unique NameFC872520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_YARLI (Translationally-controlled tumor protein homolog OS=Yarrowia lipolytica GN=YALI0E27071g PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20
Identity = 56/170 (32.94%), Postives = 93/170 (54.71%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAADVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 612
            M++++D+++ DE+ SD+F  K ++N +++EV+   +     DVDIGANPS                V ++V +FRLQ    FDKK ++TY+K ++K +   L+E   E  E F+K  +   K +++   D  F+ GESM  DG +    Y+E  T P  ++    +KE K
Sbjct:    1 MIIFKDVISNDEMCSDAFEPKVVDN-VVYEVDCTMIQVAEGDVDIGANPSAEDAEEGVDSDVQT--VNNVVHSFRLQST-GFDKKSYLTYLKGYMKSIKNYLAENKPEEVENFEKGAQAYAKKIVANFKDFDFYTGESMDPDGMVALLNYREDGTTPYLIFWKHGIKEEK 166          
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_LATJA (Translationally-controlled tumor protein homolog OS=Lateolabrax japonicus GN=tpt1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19
Identity = 61/173 (35.26%), Postives = 91/173 (52.60%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQ--GAADVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 615
            M++Y+ +++GDE+ SD+F  KE  NGI +EV+GK   +     D  I AN S                 VDIV   +LQE  +FDKK +  Y+K ++K +  KL EE+ E    F  ++    K +L+ L + QFF GE+M+ +G +    Y+E  T P  L+  D L   KC
Sbjct:    1 MIIYKCIISGDEMFSDAFKVKESANGIFYEVDGKITTRTDNIDDSLISANASAEETTDCTDSSVVSG--VDIVLNHKLQET-SFDKKSYKVYIKDYVKAIKQKLQEEKPERVDAFMADVAEEVKEILNNLKNYQFFTGENMNPEGMVGLLDYREDGTTPYMLFFKDGLLAEKC 170          
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_ANOGA (Translationally-controlled tumor protein homolog OS=Anopheles gambiae GN=Tctp PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 64/173 (36.99%), Postives = 92/173 (53.18%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAADVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 612
            M +++D+ TGDE+ SD++  K +++ +++EV GK V +   DV + GANPS                 VDIV   RL E    DKK F TY+K ++K L  +L E+     E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:    1 MKIWKDVFTGDEMFSDTYKVKLVDD-VMYEVYGKHVSRTLGDVQLDGANPSAEEAEEGTESATESG--VDIVLNHRLVETGFSDKKQFTTYLKDYMKKLVTRLEEKSPGEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESVPVLLCFKHGLEEEK 170          
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_PLUXY (Translationally-controlled tumor protein homolog OS=Plutella xylostella GN=Tctp PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19
Identity = 62/174 (35.63%), Postives = 93/174 (53.45%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAADVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVK 612
            M +Y+D++TGDE+ SD++  K ++  +++EV GK V +   DV I G NPS                 VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ ++FK N+    K +L +  +LQFF GESM  DG +    Y++  G + P  ++    L E K
Sbjct:    1 MRIYKDIITGDEMFSDTYKMKLVDE-VIYEVTGKLVTRTHGDVQIEGFNPSAEEADEGTDAATESG--VDIVLNHRLMETYAFGDKKSYTLYLKDYMKKLVAKLEETAPDQVDVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMCEYRDINGVSTPVMMFFKHGLLEEK 171          
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_DROYA (Translationally-controlled tumor protein homolog OS=Drosophila yakuba GN=Tctp PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.029e-19
Identity = 60/175 (34.29%), Postives = 96/175 (54.86%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAADVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 615
            M +Y+D++TGDE+ +D++  K ++  +++EV GK + +   D+ + GAN S                 VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L E KC
Sbjct:    1 MKIYKDIITGDEMFADTYKMKLVDE-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLDEEKC 172          
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_CANAL (Translationally-controlled tumor protein homolog OS=Candida albicans GN=TMA19 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.029e-19
Identity = 60/170 (35.29%), Postives = 90/170 (52.94%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAADVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 612
            ML+++D+++GDELLSD++  K ++ G ++E +   V  G  D+DIGANPS                V ++V +FRLQ    FDKK F TY+K ++K +   L+E   +  E F+K      K +L    D +F+ GESM  D  +V   Y+E  T P        +KE K
Sbjct:    1 MLIFEDVISGDELLSDAYDVKLVD-GAVYEADCAMVTVGNGDIDIGANPSAEDGEEALEDGAET--VNNVVYSFRLQPT-MFDKKSFTTYIKGYMKRIKAYLAENDPDSVEAFEKGATAYVKKVLGSFKDWEFYTGESMDPDAMVVLLNYREDGTTPYVAIWKHGVKENK 166          
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_YEAST (Translationally-controlled tumor protein homolog OS=Saccharomyces cerevisiae GN=TMA19 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19
Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAADVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 573
            M++Y+D+ + DELLSD++  K +++ +++E +   V  G  ++DIGANPS                V ++V +FRLQ Q AFDKK F+TY+K ++K +  KL E   E    F+K  +   K ++    D +FF GESM  D  +V   Y+E  T P
Sbjct:    1 MIIYKDIFSNDELLSDAYDAKLVDD-VIYEADCAMVNVGGDNIDIGANPSAEGGDDDVEEGAEM--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153          
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_PIG (Translationally-controlled tumor protein OS=Sus scrofa GN=TPT1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19
Identity = 59/174 (33.91%), Postives = 92/174 (52.87%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAADVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 615
            M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_PANTR (Translationally-controlled tumor protein OS=Pan troglodytes GN=TPT1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19
Identity = 59/174 (33.91%), Postives = 92/174 (52.87%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAADVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 615
            M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of FC872520 vs. ExPASy Swiss-Prot
Match: TCTP_HUMAN (Translationally-controlled tumor protein OS=Homo sapiens GN=TPT1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19
Identity = 59/174 (33.91%), Postives = 92/174 (52.87%), Query Frame = 1
Query:  112 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAADVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 615
            M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
The following BLAST results are available for this feature:
BLAST of FC872520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
TCTP_YARLI7.971e-2032.94Translationally-controlled tumor protein homolog O... [more]
TCTP_LATJA1.041e-1935.26Translationally-controlled tumor protein homolog O... [more]
TCTP_ANOGA1.776e-1936.99Translationally-controlled tumor protein homolog O... [more]
TCTP_PLUXY2.319e-1935.63Translationally-controlled tumor protein homolog O... [more]
TCTP_DROYA3.029e-1934.29Translationally-controlled tumor protein homolog O... [more]
TCTP_CANAL3.029e-1935.29Translationally-controlled tumor protein homolog O... [more]
TCTP_YEAST3.956e-1936.31Translationally-controlled tumor protein homolog O... [more]
TCTP_PIG3.956e-1933.91Translationally-controlled tumor protein OS=Sus sc... [more]
TCTP_PANTR3.956e-1933.91Translationally-controlled tumor protein OS=Pan tr... [more]
TCTP_HUMAN3.956e-1933.91Translationally-controlled tumor protein OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AH07ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3AH07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872520 ID=FC872520; Name=FC872520; organism=Citrus clementina; type=EST; length=847bp
GGGGCCCTCTCGCTCTCGCTCTCTCACCGCTGCGTCTCTCTCTCTCTCTC
TCTCTCCAGTTTTCTCCGTTGATTGTTTTTCTTTTTTGTGTTCGCGAGAG
AGACTGCAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCTT
CTCTCCGACTCTTTTCCCTACAAGGAAATTGAGAATGGGATTCTGTGGGA
AGTTGAGGGAAAGTGGGTTGTACAAGGAGCCGCTGATGTTGACATTGGTG
CAAATCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAA
GCCGTGAAGGTGGTCGACATTGTCGACACATTCAGGCTACAGGAGCAACC
CGCTTTTGACAAGAAGCCGTTTGTAACATACATGAAGAGATTCATCAAGT
TGCTGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAAT
ATTGAGGGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATT
CTTTGTTGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACT
ACAAGGAAGGTGCGACCGACCCAACATTTTTGTATATGGCTGATGCATTG
AAGGAGGTGAAGTGCTAAGCTGGGCTTCGAAGAGGAAGTGCCTGCTGTAG
TTCTAATTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGTGCTG
GTTTACTCGGGACTTGTGCTTGCTGTTTTTTAGTTTTTATTTTGTCATAA
ACAATATGTTTTTCTGCTCTTAATTATTGGGTTTTATGGTTTGAGATTGA
ATTACCAAATAACTTAATAGTTTTTGCAAAAAAAAAAAAAAAAAAAA
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