FC872523

Overview
NameFC872523
Unique NameFC872523
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length511
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.580e-21
Identity = 39/52 (75.00%), Postives = 46/52 (88.46%), Query Frame = 3 
Query:  204 ETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKS 359
            ETQEMIDFAA+H + ADIE+I AD VNTAMERLAK DVRYRFV+D+ NT++S
Sbjct:  327 ETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNTLRS 378

HSP 2 Score: 36.5798 bits (83), Expect = 5.580e-21
Identity = 15/29 (51.72%), Postives = 22/29 (75.86%), Query Frame = 2 
Query:   83 LKSQGKLVLLGAPEKSLELPAFPLLTGRK 169
            LK +GK++L+G PEK L++P F L+ G K
Sbjct:  287 LKPKGKMILVGLPEKPLQIPTFALVGGGK 315
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.229e-20
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 3 
Query:  201 KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTM 353
            KETQEM+DF AKHNI ADIE+I  D +NTAMERLAK+DVRYRFVIDVAN++
Sbjct:  307 KETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357

HSP 2 Score: 34.6538 bits (78), Expect = 1.229e-20
Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1 
Query:   25 DGIIDTVSAVHPLMPLFGLVEISRKASTSWCTREVTRATSFPPAHGEEV 171
            D IIDT+SAVH L PL GL++++ K        +      FP   G ++
Sbjct:  249 DYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKM 297
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.007e-19
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 3 
Query:  201 KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKS 359
            KETQEM+DF  KHNI ADIE+I    +NTAMERL KADV+YRFVIDVAN+  S
Sbjct:  306 KETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358

HSP 2 Score: 37.3502 bits (85), Expect = 1.007e-19
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = 1 
Query:   25 DGIIDTVSAVHPLMPLFGLVEISRKASTSWCTREVTRATSFPPAHGEEV 171
            D IIDT+SA H LMPL GL++++ K  T     +    + FP   G ++
Sbjct:  248 DYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKL 296
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.703e-19
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 3 
Query:  204 ETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTM 353
            +TQEMI+ AAKH + ADIEVI AD VNTAMERLAKADVRYRFVIDV NT+
Sbjct:  311 DTQEMIELAAKHGVTADIEVIGADDVNTAMERLAKADVRYRFVIDVGNTL 360

HSP 2 Score: 34.2686 bits (77), Expect = 1.703e-19
Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 2 
Query:   83 LKSQGKLVLLGAPEKSLELPAFPLLTGRK 169
            LK  GK++L+G PE  LE+P F L+ G +
Sbjct:  271 LKPNGKMILVGLPENPLEVPPFSLVHGNR 299
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.748e-19
Identity = 37/54 (68.52%), Postives = 47/54 (87.04%), Query Frame = 3 
Query:  201 KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKST 362
            KETQEM+DF  KHNI A+IE+I  D +NTA+ERL+KADV+YRFVIDVAN++ S+
Sbjct:  299 KETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANSLSSS 352

HSP 2 Score: 33.8834 bits (76), Expect = 3.748e-19
Identity = 18/49 (36.73%), Postives = 28/49 (57.14%), Query Frame = 1 
Query:   25 DGIIDTVSAVHPLMPLFGLVEISRKASTSWCTREVTRATSFPPAHGEEV 171
            D IIDT+SAVH L+ L GL++++ K  T     +  +   FP   G ++
Sbjct:  241 DYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKL 289
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.362e-19
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 3 
Query:  201 KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANT 350
            ++ Q M+DFA +H I A++EVI  DYVNTAMERL K DVRYRFVIDVA +
Sbjct:  377 RDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 426

HSP 2 Score: 31.9574 bits (71), Expect = 5.362e-19
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 1 
Query:   25 DGIIDTVSAVHPLMPLFGLVE 87
            DGI++TVSA HP+ PLF L++
Sbjct:  319 DGILNTVSAWHPVAPLFALMK 339

HSP 3 Score: 30.8018 bits (68), Expect = 5.362e-19
Identity = 12/29 (41.38%), Postives = 20/29 (68.97%), Query Frame = 2 
Query:   83 LKSQGKLVLLGAPEKSLELPAFPLLTGRK 169
            +K   ++V +GAP + LELPA+ ++ G K
Sbjct:  338 MKPMAQMVFVGAPTRPLELPAYAIVPGGK 366
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.166e-18
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 3 
Query:  201 KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANT 350
            ++ Q M+DFA +H I A++EVI  DYVNTAMERL K DVRYRFVIDVA +
Sbjct:  380 RDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 429

HSP 2 Score: 32.3426 bits (72), Expect = 1.166e-18
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 1 
Query:   25 DGIIDTVSAVHPLMPLFGLVE 87
            DGI++TVSA HP+ PLF L++
Sbjct:  322 DGILNTVSAWHPIAPLFSLMK 342

HSP 3 Score: 29.261 bits (64), Expect = 1.166e-18
Identity = 11/29 (37.93%), Postives = 19/29 (65.52%), Query Frame = 2 
Query:   83 LKSQGKLVLLGAPEKSLELPAFPLLTGRK 169
            +K   ++V +G P + LELPA+ ++ G K
Sbjct:  341 MKPMAQMVFVGGPTRPLELPAYAIVPGGK 369
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.520e-18
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 3 
Query:  204 ETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTM 353
            E Q M+DFA +H I AD+EV+  D VN A+ RL + DVRYRFV+DVA TM
Sbjct:  303 ECQAMLDFAGEHGIAADVEVVAMDAVNAALGRLERNDVRYRFVVDVAGTM 352

HSP 2 Score: 34.2686 bits (77), Expect = 1.520e-18
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 1 
Query:   25 DGIIDTVSAVHPLMPLFGLVE 87
            DGIIDTVSA HPL+PL  L++
Sbjct:  244 DGIIDTVSAGHPLVPLLSLLK 264

HSP 3 Score: 32.7278 bits (73), Expect = 1.520e-18
Identity = 13/29 (44.83%), Postives = 22/29 (75.86%), Query Frame = 2 
Query:   83 LKSQGKLVLLGAPEKSLELPAFPLLTGRK 169
            LK +G++V++GAP   L+LPA+ ++ G K
Sbjct:  263 LKPKGQMVVVGAPAMPLQLPAYAIIEGGK 291
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.970e-18
Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 3 
Query:  201 KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTM 353
            ++TQEM+DFA +H + A++EVI  + VN AMERL K DVRYRFVIDVANTM
Sbjct:  308 RDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTM 358

HSP 2 Score: 31.9574 bits (71), Expect = 1.970e-18
Identity = 15/20 (75.00%), Postives = 16/20 (80.00%), Query Frame = 1 
Query:   25 DGIIDTVSAVHPLMPLFGLV 84
            DGIIDTVSAVH L PL  L+
Sbjct:  250 DGIIDTVSAVHDLTPLITLL 269

HSP 3 Score: 26.1794 bits (56), Expect = 1.970e-18
Identity = 11/29 (37.93%), Postives = 20/29 (68.97%), Query Frame = 2 
Query:   83 LKSQGKLVLLGAPEKSLELPAFPLLTGRK 169
            L++ G+LV +G+P K ++L  +PL +  K
Sbjct:  269 LRTHGQLVPVGSPGKPVQLALYPLQSDGK 297
[Close]
BLAST of FC872523 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 2.501e-17
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 3 
Query:  201 KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMK 356
            KETQEM+D   +HNI  DIE++  D +N A+ RLA+ DVRYRFVI+V    K
Sbjct:  308 KETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINVGGDSK 359

HSP 2 Score: 43.8986 bits (102), Expect = 2.501e-17
Identity = 19/29 (65.52%), Postives = 25/29 (86.21%), Query Frame = 2 
Query:   83 LKSQGKLVLLGAPEKSLELPAFPLLTGRK 169
            LK  GKLVL+GAPEK +ELP+FPL+ G++
Sbjct:  269 LKVNGKLVLVGAPEKPVELPSFPLIFGKR 297
The following BLAST results are available for this feature:
BLAST of FC872523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CADH7_ORYSJ5.580e-2175.00Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH9_ARATH1.229e-2078.43Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH_MEDSA1.007e-1971.70Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH3_ORYSJ1.703e-1980.00Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
MTDH1_STYHU3.748e-1968.52Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CAD8B_ORYSJ5.362e-1966.00Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CAD8C_ORYSJ1.166e-1866.00Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CAD8D_ORYSJ1.520e-1860.00Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH9_ORYSJ1.970e-1866.67Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH6_ORYSJ2.501e-1755.77Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AH10ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3AH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872523 ID=FC872523; Name=FC872523; organism=Citrus clementina; type=EST; length=511bp
CAGGCTTGCCATAGGGCACAATAGGATGGTATCATCGATACAGTATCTGC
AGTTCACCCGCTAATGCCGTTGTTCGGACTGGTTGAAATCTCAAGGAAAG
CTAGTACTTCTTGGTGCACCCGAGAAGTCACTAGAGCTACCAGCTTTCCC
CCTGCTCACGGGGAGGAAGTATAGTTGGTGGCAGTCTCATTGGGGGGTTG
AAGGAGACTCAAGAGATGATTGATTTTGCAGCAAAACACAACATCAGAGC
TGATATTGAGGTCATACCGGCCGACTATGTGAACACAGCCATGGAGCGCC
TTGCTAAAGCCGATGTTAGATATCGCTTTGTCATCGACGTTGCAAACACA
ATGAAGTCCACTCCTTAAATTTTCTCCCTTTTGAGTTGCGCTTAAAACGA
GGAATGTGCGTTTATTGTTGAGTCACAACATCGTCTAAGTTTTAGATTAT
GTTAGTCTTTTGTTGTGATTTCAAAACTGTTTTTACTTTTTAAGAATAAT
AATTTCGTGAC
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