FC872526

Overview
NameFC872526
Unique NameFC872526
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length873
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGB1_PEA (Leghemoglobin-1 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.019e-25
Identity = 71/149 (47.65%), Postives = 93/149 (62.42%), Query Frame = 2
Query:  278 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMK 724
            FT++QEALV  S +  K+N    ++ F+  + E AP+AK LF+FLKD+   VE +PKL+ HA  VF +  +SA QLR  G+V +  + L   GA H + GV + HF V K ALL+TIK+A    WS EL  AW  AYD LA AIK  MK
Sbjct:    3 FTDKQEALVNSS-SEFKQNLPGYSILFYTIVLEKAPAAKGLFSFLKDT-AGVEDSPKLQAHAEQVFGLVRDSAAQLRTKGEVVLGNATL---GAIHVQKGVTNPHFVVVKEALLQTIKKASGNNWSEELNTAWEVAYDGLATAIKKAMK 146          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGB2_SOYBN (Leghemoglobin C2 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.331e-25
Identity = 69/146 (47.26%), Postives = 90/146 (61.64%), Query Frame = 2
Query:  275 AFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 712
            AFTE+QEALV  S+ A K N  + ++ F+  I E AP+AK LF+FL +   P   NPKL  HA  +F +  +SA QL+  G V    +    LG+ H +  + D  F V K ALL+TIKEAV + WS EL +AW  AYD+LAAAIK
Sbjct:    3 AFTEKQEALVSSSFEAFKANIPQYSVVFYTSILEKAPAAKDLFSFLSNGVDP--SNPKLTGHAEKLFGLVRDSAGQLKANGTVVADAA----LGSIHAQKAITDPQFVVVKEALLKTIKEAVGDKWSDELSSAWEVAYDELAAAIK 142          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGB3_SOYBN (Leghemoglobin C3 OS=Glycine max GN=LGB1 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.738e-25
Identity = 68/146 (46.58%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  275 AFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 712
            AFT++QEALV  S+ A K N  + ++ F+  I E AP AK LF+FL +   P   NPKL  HA  +F +  +SA QL+ +G V +  +    LG+ H +  + D  F V K ALL+TIKEAV + WS EL +AW  AYD+LAAAIK
Sbjct:    3 AFTDKQEALVSSSFEAFKTNIPQYSVVFYTSILEKAPVAKDLFSFLANGVDPT--NPKLTGHAEKLFGLVRDSAGQLKASGTVVIDAA----LGSIHAQKAITDPQFVVVKEALLKTIKEAVGDKWSDELSSAWEVAYDELAAAIK 142          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGBA_SOYBN (Leghemoglobin A OS=Glycine max GN=LBA PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.270e-25
Identity = 68/148 (45.95%), Postives = 90/148 (60.81%), Query Frame = 2
Query:  269 VTAFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 712
            + AFTE+Q+ALV  S+ A K N  + ++ F+  I E AP+AK LF+FL +   P   NPKL  HA  +F +  +SA QL+ +G V    +    LG+ H +  V D  F V K ALL+TIK AV + WS EL  AW  AYD+LAAAIK
Sbjct:    1 MVAFTEKQDALVSSSFEAFKANIPQYSVVFYTSILEKAPAAKDLFSFLANGVDPT--NPKLTGHAEKLFALVRDSAGQLKASGTVVADAA----LGSVHAQKAVTDPQFVVVKEALLKTIKAAVGDKWSDELSRAWEVAYDELAAAIK 142          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGBA_PHAVU (Leghemoglobin A OS=Phaseolus vulgaris PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.872e-25
Identity = 67/146 (45.89%), Postives = 92/146 (63.01%), Query Frame = 2
Query:  275 AFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 712
            AFTE+QEALV  SW A K N  + ++ F+  I E AP+AK LF+FL +   P   NPKL  HA ++F +  +SA QLR  G V    +    LG+ H + GV+++ F V K ALL+T+K+AV + W+ +L  A   AYD+LAAAIK
Sbjct:    3 AFTEKQEALVNSSWEAFKGNIPQYSVVFYTSILEKAPAAKNLFSFLANGVDPT--NPKLTAHAESLFGLVRDSAAQLRANGAVVADAA----LGSIHSQKGVSNDQFLVVKEALLKTLKQAVGDKWTDQLSTALELAYDELAAAIK 142          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGB2_VICFA (Leghemoglobin 29 OS=Vicia faba GN=LB29 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.510e-24
Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 2
Query:  278 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 721
            FT  QEALV  SW A  +N    ++ F+  I E AP AK +F+ LKD++     NP +  H   VF M  ++A QL+  G+V + ++    LG  H +  V   HF V K ALL+TIKEAV + WS EL NAW  AYD LA AI  EM
Sbjct:    3 FTLRQEALVNSSWEAFNQNLPLFSVLFYTFILEKAPIAKNMFSVLKDANEIPLANPSINAHTEMVFEMVRDAAAQLQTTGQVVLGDTT---LGVVHTQKRVDGLHFMVVKEALLKTIKEAVGDKWSEELSNAWEIAYDGLAVAIMKEM 147          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGB1_SOYBN (Leghemoglobin C1 OS=Glycine max PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.281e-24
Identity = 69/146 (47.26%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  275 AFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 712
            AFTE+QEALV  S+ A K N  + ++ F+  I E AP+AK LF+FL +   P   NPKL  HA  +F +  +SA QL+  G V    +    L + H +  V D  F V K ALL+TIKEAV   WS EL +AW  AYD+LAAAIK
Sbjct:    3 AFTEKQEALVSSSFEAFKANIPQYSVVFYNSILEKAPAAKDLFSFLANGVDPT--NPKLTGHAEKLFALVRDSAGQLKTNGTVVADAA----LVSIHAQKAVTDPQFVVVKEALLKTIKEAVGGNWSDELSSAWEVAYDELAAAIK 142          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGB2_PHAVU (Leghemoglobin OS=Phaseolus vulgaris PE=2 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 66/146 (45.21%), Postives = 87/146 (59.59%), Query Frame = 2
Query:  275 AFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 712
            AFTE+QEALV  SW A K N  + ++ F+  I E AP+AK LF+FL +   P   NPKL  HA ++F +  +SA QLR  G V    +    LG+ H +  + D  F V K ALL+T+KEAV + W+ EL  A   AYD+ AA IK
Sbjct:    3 AFTEKQEALVNSSWEAFKGNIPQYSVVFYTSILEKAPAAKNLFSFLANGVDPT--NPKLTAHAESLFGLVRDSAAQLRANGAVVADAA----LGSIHSQKALNDSQFLVVKEALLKTLKEAVGDKWTDELSTALELAYDEFAAGIK 142          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGB1_VIGUN (Leghemoglobin-1 OS=Vigna unguiculata GN=LBI PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 65/148 (43.92%), Postives = 89/148 (60.14%), Query Frame = 2
Query:  269 VTAFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 712
            + AF+++QEALV  ++ A K N  + ++ F+  I E AP+AK LF+FL +       NPKL  HA  +F +  +SA QLR +G V    +    LGA H +  V D  F V K AL++T+KEAV + WS EL  A   AYD+LAAAIK
Sbjct:    1 MVAFSDKQEALVNGAYEAFKANIPKYSVVFYTTILEKAPAAKNLFSFLANGVDAT--NPKLTGHAEKLFGLVRDSAAQLRASGGVVADAA----LGAVHSQKAVNDAQFVVVKEALVKTLKEAVGDKWSDELGTAVELAYDELAAAIK 142          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: LGB2_VIGUN (Leghemoglobin-2 OS=Vigna unguiculata GN=LBII PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.557e-21
Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  269 VTAFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 712
            + AF+++QE LV  ++ A K +  + ++ F+  I E AP+AK LF+FL +       NPKL  HA  +F +  +SA QLR +G V    +    LGA H +  V D  F V K AL++T+KEAV + WS EL  A   AYD+LAAAIK
Sbjct:    1 MVAFSDKQEGLVNGAYEAFKADIPKYSVVFYTTILEKAPAAKNLFSFLANGVDAT--NPKLTGHAEKLFGLVRDSAAQLRASGGVVADAA----LGAVHSQKAVNDAQFVVVKEALVKTLKEAVGDKWSDELGTAVELAYDELAAAIK 142          
The following BLAST results are available for this feature:
BLAST of FC872526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
LGB1_PEA1.019e-2547.65Leghemoglobin-1 OS=Pisum sativum PE=1 SV=2[more]
LGB2_SOYBN1.331e-2547.26Leghemoglobin C2 OS=Glycine max PE=1 SV=2[more]
LGB3_SOYBN1.738e-2546.58Leghemoglobin C3 OS=Glycine max GN=LGB1 PE=2 SV=2[more]
LGBA_SOYBN2.270e-2545.95Leghemoglobin A OS=Glycine max GN=LBA PE=1 SV=2[more]
LGBA_PHAVU3.872e-2545.89Leghemoglobin A OS=Phaseolus vulgaris PE=1 SV=2[more]
LGB2_VICFA2.510e-2444.59Leghemoglobin 29 OS=Vicia faba GN=LB29 PE=2 SV=1[more]
LGB1_SOYBN4.281e-2447.26Leghemoglobin C1 OS=Glycine max PE=2 SV=2[more]
LGB2_PHAVU7.303e-2445.21Leghemoglobin OS=Phaseolus vulgaris PE=2 SV=3[more]
LGB1_VIGUN6.835e-2243.92Leghemoglobin-1 OS=Vigna unguiculata GN=LBI PE=2 S... [more]
LGB2_VIGUN7.557e-2142.57Leghemoglobin-2 OS=Vigna unguiculata GN=LBII PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CA02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1CA02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872526 ID=FC872526; Name=FC872526; organism=Citrus clementina; type=EST; length=873bp
GGGGCTCCCTCAATTTTCTGCTCTGCATCTTGTGGCCATTCATAGTGTTG
CTTCAAAAGCTACAACCATGCTACTCTCAAATGATTCTGTCATCTACAAG
TGTGATACAAGGGATTTGAGTAAGATTTTTGCAACCTCAACGTCAAGAGT
TAGGCATCAACAATACGTGAATCTCTCATGGAAGATGAGGGATGGATCAT
TGAAGGGTCTTTTTTGCACAGCTCCAAAATCAATCAGAAGTGTGAGGAGG
AACAGCGGAAGCTTCAACGTGACTGCTTTTACAGAAGAGCAAGAGGCTCT
AGTGGTCAAATCTTGGAATGCCATGAAAAAAAATTCTGGGGAACTTGCTC
TTAAGTTCTTCTTGAGGATCTTTGAGATTGCACCATCAGCAAAGAAGCTG
TTCACTTTTCTCAAAGATTCAGATATTCCTGTGGAGCAGAATCCGAAACT
AAAGCCCCATGCCACGACTGTCTTTGTTATGACGTGTGAATCGGCAGTGC
AACTTAGAAAGGCTGGCAAAGTTACAGTGAGAGAGTCCAATCTAAAAGAC
TTGGGAGCTACCCATTTCAAATACGGAGTTGCTGATGAACATTTTGAGGT
GACAAAGTATGCATTGTTGGAGACCATAAAGGAAGCAGTACCTGAAATGT
GGTCACCAGAGTTGAAGAATGCTTGGGCGGAGGCTTATGATCAACTGGCT
GCCGCCATCAAAACTGAAATGAAGCCTCCTTCATAATTTGCTGATTGAAT
GTAAAAGTGATGCTGTTTCATGGAAAAAAATAATATTGTAAAAATGTCAT
GTAATCATCAATTATCGAATATTGTGTTGATCTAATCTAAGATCCAGTTC
TCTCAAAAAAAAAAAAAAAAAAA
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