FC872527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.923e-77 Identity = 144/233 (61.80%), Postives = 167/233 (71.67%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 689 FYTYDAFI AAK+FPAF +G++ RKRE+AAF AQT HETTGG W AP G Y WGYC+NRE+ A DYC DPNYPC GK Y+GRGP+QLTWNYNY +CG +G DLLNNPDLLAT+ +SFKSA WFWMT Q PKPSCH+VII W PS +D AGR+PG+GL TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQR Y SM Sbjct: 98 FYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIG--VDLLNNPDLLATDP----TISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 7.307e-77 Identity = 142/233 (60.94%), Postives = 170/233 (72.96%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 689 FYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTGG W AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QL+WNYNY +CG +G DLLNNPDLL+++ +SFKSA WFWMT Q PKPSCH VII W PS++D AGR+PGYG+ TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQ P+G + SM Sbjct: 100 FYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIG--VDLLNNPDLLSSDP----TISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.627e-76 Identity = 137/231 (59.31%), Postives = 169/231 (73.16%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 689 FY+Y+AFI AA++FP FG SG+ RKREIAAFFAQT HETTGGW AP G YAWGYCF RE G DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFK+A+WFWMT Q PKPSCH+VII W PS+ D A RLPG+G+ TNIINGG+ECG G ++ V++RIGF+ +C G+ PGDNLDC NQR +G L+ ++ Sbjct: 105 FYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPG-DYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDP----VISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.627e-76 Identity = 135/232 (58.19%), Postives = 166/232 (71.55%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 698 FYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ++WNYNY +CG +G DLLN PDL+AT+ V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNIINGG+ECG G + V++RIGFF +C G+ G+NLDC +Q P+G +L+ + +S Sbjct: 102 FYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIG--VDLLNKPDLVATDS----VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 6.186e-76 Identity = 135/232 (58.19%), Postives = 165/232 (71.12%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 698 FYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ++WNYNY +CG +G DLLN PDL+AT+ V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNIINGG+ECG G + V++RIGFF +C G+ G+NLDC +Q P+G +L + +S Sbjct: 101 FYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIG--VDLLNKPDLVATDS----VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 283.493 bits (724), Expect = 1.055e-75 Identity = 141/233 (60.52%), Postives = 168/233 (72.10%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 689 FYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTGG W AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QL+WNYNY +CG +G DLLNNPDLL+++ +SFKSA WFWMT Q PKPSCH VII W PS++D AGR GYG+ TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQ P+G + SM Sbjct: 78 FYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIG--VDLLNNPDLLSSDP----TISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 302
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.800e-75 Identity = 133/228 (58.33%), Postives = 167/228 (73.25%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMA 680 FYTYDA + AA AFP F +G++ RKRE+AAF QT HETTGGW AP G Y+WGYCF E+GA +S YC P+ +PC KY+GRGPIQL++NYNY GE +G EDLLNNP+L+A++ V+SFK+A+WFWMT Q PKPSCH+VI +W PS+ D+ AGR+PGYG+ TNIINGG+ECG+G +D V NRIGF+ +C GI G NLDC +QRP+ L A Sbjct: 112 FYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIG--EDLLNNPELVASDP----VVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.800e-75 Identity = 131/222 (59.01%), Postives = 162/222 (72.97%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 662 FYTYDAFI AAK+FP FG +G+ RK+EIAAFF QT HETTGGW AP G Y+WGYCF +E SS+YC P+ +PC YYGRGP+QL+WNYNY +CG +G DLLNNPDL++ + V++FK+AIWFWMT Q PKPSCH VI+ +W+PS D AGR+PGYG+ TNIINGG+ECG G + V +RIGF+ +C G+ PG NLDC NQR + Sbjct: 97 FYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNP-SSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIG--SDLLNNPDLVSNDP----VIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDCYNQRSF 311
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 281.952 bits (720), Expect = 3.070e-75 Identity = 130/222 (58.56%), Postives = 158/222 (71.17%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 662 FYTYDAF+ AA A+P F +G+ KRE+AAF AQT HETTGGWP AP G Y+WGYCF E + YC+P +PC KYYGRGPIQ+T+NYNY G+ +G DLLNNPDL+A++ +SFK+A WFWMT Q PKPSCH VI +W PSA+D AGR+PGYG TNIINGG+ECG+G +D V +RIGF+ +C G+ GDNLDC NQRPY Sbjct: 102 FYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIG--SDLLNNPDLVASD----ATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 5.237e-75 Identity = 135/231 (58.44%), Postives = 168/231 (72.73%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 689 FYTYDAFI AAKAFP FG +G+ T RKREIAAF AQT HETTGGW AP G YAWGYC+ RE G+ + YC P+ +PC KYYGRGPIQ+++NYNY + G+ +G DL+NNPDL+AT+ V+SFK+A WFWMT Q PKPSCH VI W PS D +AGRLPG+G+ TNIINGG+ECG G V++RIGF+ +C + G+NLDC+NQRP+G L+ ++ Sbjct: 91 FYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIG--VDLVNNPDLVATD----AVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314 The following BLAST results are available for this feature:
BLAST of FC872527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872527 ID=FC872527; Name=FC872527; organism=Citrus clementina; type=EST; length=863bpback to top |