FC872527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.554e-31 Identity = 77/217 (35.48%), Postives = 110/217 (50.69%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 644 FYT +F+ AA+++ F N KREIAAFFA HET C+ E+ A+ DYCD + +PC+ KYYGRGP+Q++WN+NY G+ +G D L +PD +A + +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 109 FYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGF--DGLRDPDKVAQDP----TISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.350e-30 Identity = 81/218 (37.16%), Postives = 112/218 (51.38%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP---NYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRN-RIGFFTTFCGKFGIQPGDNLDC 644 FYT AF+ A K +P F + G++ KREIAAFFA HET +C+ E+ S+ YCDP +PC KYYGRGP+Q++WNYNY G + G D L +P +A + V++FK+A+WFWM S H V+ G+G TT + +ECG G N A N R+G++ +C + G+ PG NL C Sbjct: 94 FYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEIN-KSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAI--GFDGLGDPGRVARD----AVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.303e-30 Identity = 76/216 (35.19%), Postives = 113/216 (52.31%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 644 FYT F+EA A+P FG + RKREIAA+FA HET C+ E +++YC + YPC +Y+GRGP+QL+WNYNY+ G+ L D LN+PD++ + ++SFK+++WFW+ + VI+D + G+G T IINGG EC + R+G++ +C + G+ PG+NL C Sbjct: 71 FYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGH-------------LCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHF--DGLNDPDIVGRDP----IISFKTSLWFWI-----RKGVQYVILDPNQ------------GFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.547e-29 Identity = 79/223 (35.43%), Postives = 108/223 (48.43%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN----YPCRGK--YYGRGPIQLTWNYNYLRCG-----EGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 644 FYT DAF+ A ++ FG G+E KREIAA FA HET +C+ E+ AS DYCD YPC Y+GRGPIQL+WN+NY G +GLG E + N+ V+SFK+A+W+WM P +I++ G+G T ING +EC V+ R+ ++T +C + G+ GDNL C Sbjct: 93 FYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGH-------------FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDV-----------VVSFKTALWYWMQHVRP-------VINQ--------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.674e-29 Identity = 79/218 (36.24%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 9 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRN-RIGFFTTFCGKFGIQPGDNLDC 644 FYT AF+ A A+P F + G E KREIAAFFA HET +C+ E+ S+ YCD + +PC KYYGRGP+Q++WNYNY G +G L +P+ +A + V++FK+A+WFWM N+V+ G+G T ING +EC G N A N R+G++ +C + + PG NL C Sbjct: 105 FYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEIN-KSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNG--LADPNRVA----QDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECN-GNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of FC872527 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 3 Query: 411 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 548 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of FC872527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872527 ID=FC872527; Name=FC872527; organism=Citrus clementina; type=EST; length=863bpback to top |