FC872533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.136e-16 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCS 379 I+C QV ++PC+SY G ACC G+R+LN+A+ TT DRRT CNC+K A I GLN ++P C PY ++ +DCS Sbjct: 28 ISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCS 115
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.483e-16 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCS 379 I+C QV ++PC+SY G ACC G+R+LN+A+ TT DRRT CNC+K A I GLN ++P C PY ++ +DCS Sbjct: 27 ISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCS 114
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.937e-16 Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSK 382 ITC QV + PC++Y G ACC G+R+L AA+ TT DRRT CNC+K A I GLN ++P C PY ++ +DCS+ Sbjct: 26 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSR 114
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.937e-16 Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSK 382 ITC QV + PC++Y G ACC G+R+L AA+ TT DRRT CNC+K A I GLN ++P C PY ++ +DCS+ Sbjct: 26 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSR 114
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16 Identity = 41/87 (47.13%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDC 376 ITC QV+ L PCI+Y GG V CC+G+R+LN A+KTT DR+ CNC+K I GLN + LP C PYK++ DC Sbjct: 1 ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDC 87
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCS 379 ITC V+ L PCI Y + GG + CC GI+ALNAA+ TT DR+T CNC+K A I G+NY + LP +C PY ++ +C+ Sbjct: 28 ITCGMVSSKLAPCIGY-LKGGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCN 114
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.142e-15 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISY--GVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCS 379 +T QVT L PCI+Y G GAV P CC GI++LN+A++TT R+ C C+K AA I G+N+ + LP C PYK++ DC+ Sbjct: 28 VTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCN 117
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.142e-15 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISY--GVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCS 379 +T QVT L PCI+Y G GAV P CC GI++LN+A++TT R+ C C+K AA I G+N+ + LP C PYK++ DC+ Sbjct: 24 VTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCN 113
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.654e-15 Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGV-LGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSK 382 +TC QV+ + PC+SY G CC G+R+LN+A++TT DRR CNC+K A I GLN + ++P C PY ++ DCS+ Sbjct: 31 VTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSR 120
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.772e-15 Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGV-LGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSK 382 I+C QV + PCISY G CC G+R+LN A++TT DRR CNC+K AA + GLN ++P C PY ++ DCS+ Sbjct: 29 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR 118 The following BLAST results are available for this feature:
BLAST of FC872533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872533 ID=FC872533; Name=FC872533; organism=Citrus clementina; type=EST; length=875bpback to top |