FC872533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.876e-11 Identity = 31/89 (34.83%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSK 382 + C QV + PC++Y G CC+G+R L+ ++++ DR+T CNC+K A I LN + ++P C PY ++ D+DCS+ Sbjct: 27 LNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSR 115
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.451e-11 Identity = 37/95 (38.95%), Postives = 49/95 (51.58%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPA--CCDGIRALNAASKTTEDRRTQCNCVKEGAARI-PGLNYDRVNTLPDICRSKCPY--KLTHDLDCSKY 385 ++C +V L PC Y GG P CC+G+R LN TT DRR C C+K A + PGLN DR +P C K PY ++ + C+ Y Sbjct: 27 LSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCNTY 121
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11 Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPA--CCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSK 382 ++C VT + PC+SY V+G P+ CC G+R LN + ++ DRRT C+C+K A+ LN ++P C + ++ +DCSK Sbjct: 30 VSCGDVTSSIAPCLSY-VMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSK 119
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11 Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPA--CCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSK 382 ++C VT + PC+SY V+G P+ CC G+R LN + ++ DRRT C+C+K A+ LN ++P C + ++ +DCSK Sbjct: 30 VSCGDVTSSIAPCLSY-VMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSK 119
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11 Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSK 382 I C V + PC+SY G CCDG++ L+ +++ DR++ CNC+K A I LN D ++P C PY ++ ++DCS+ Sbjct: 24 IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR 112
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11 Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPA--CCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCS 379 +TC VT L PC++Y GA P CC G+R+L AA++T DRR CNC+K A + LNY L C + Y ++ +++C+ Sbjct: 2 VTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCN 91
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11 Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPA--CCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCS 379 +TC VT L PC++Y GA P CC G+R+L AA++T DRR CNC+K A + LNY L C + Y ++ +++C+ Sbjct: 2 VTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCN 91
BLAST of FC872533 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.313e-11 Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 2 Query: 116 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCS 379 ITC V L+PC+ Y GG V P CC G++ LN ++TT DR+ C C++ A G+N + LP C PY ++ +C+ Sbjct: 25 ITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAA---KGVNPSLASGLPGKCGVSIPYPISTSTNCA 109 The following BLAST results are available for this feature:
BLAST of FC872533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872533 ID=FC872533; Name=FC872533; organism=Citrus clementina; type=EST; length=875bpback to top |