FC872615
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 7.656e-62 Identity = 120/239 (50.21%), Postives = 148/239 (61.92%), Query Frame = 2 Query: 23 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 739 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG SG++T R +EIAAFF QT HETTGG A + GYCF+ + +YYGRGPIQLT NY + ATD +SFK+AIWFWMT Q KPS H+VI W PSA D +A R PG G+ TNIINGGIECG G N AV +RIG++ +CG + PG NLDCY+Q+ F Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLV--ATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNF 250
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.444e-60 Identity = 114/251 (45.42%), Postives = 150/251 (59.76%), Query Frame = 2 Query: 38 SREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN----LNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP-KPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF---GLILMARSM 766 + MFE +LP RN+ CP +GFYTYDA+ A + +P FG +G++ R RE+AAFFAQT ET+G + WGYC ++E++P S YC+ +YPC YYGRGP+QL WNYNY C ATDPVLSF++A+WFWM PSCHEVIT EW PS D+ AGR PG+G+ TNII G EC + +NRI ++ +C + PG NL C +Q+ F GL+ M +M Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGEC--GNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETFEDNGLLKMVGTM 316
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.385e-55 Identity = 113/257 (43.97%), Postives = 153/257 (59.53%), Query Frame = 2 Query: 14 GGELG--KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ-PPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFGLILMARS 763 GG G +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF AQT H T+ GG Y+WGYC+ S +C N +PC GK Y+ RGP+Q+ +NYNY ATDP ++FK+A+W WMTA+ P +PS H V+T +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G NLDC+ Q PF +M+ S Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 3.115e-55 Identity = 113/257 (43.97%), Postives = 153/257 (59.53%), Query Frame = 2 Query: 14 GGELG--KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ-PPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFGLILMARS 763 GG G +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF AQT H T+ GG Y+WGYC+ S +C N +PC GK Y+ RGP+Q+ +NYNY ATDP ++FK+A+W WMTA+ P +PS H V+T +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G NLDC+ Q PF +M+ S Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.225e-51 Identity = 106/239 (44.35%), Postives = 136/239 (56.90%), Query Frame = 2 Query: 23 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 739 + +IS +FE +L +R GFYTYDAFI AAK+FPAF +G+ +R RE+AAF AQT HETTGGW AP G Y G Y+GRGPIQ+++NYNY +D + FK+A+WFWMT Q PKPS H+VIT W PS+ D AGR+PGYG+ TNII+GG+ECG+G V +RIG++ NLDCY+Q+PF Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG-------------------STSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLV--TSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYKD-----------NLDCYNQKPF 199
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 7.467e-33 Identity = 87/245 (35.51%), Postives = 133/245 (54.29%), Query Frame = 2 Query: 2 GGTDGGELGKIISRE-MFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEIS-PPSPYC-NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWND-AVR-NRIGFFSTFCGKFGIQPGYNL 715 G + +G ++ E +F+ + +R D CP++GFY+Y +F+ AA++FPAFG G+ R RE+AAF A T+G D +AWG C I+ + + +C + ++PC KY RGPIQLT N+NY DP++SFK+A+WFWM+ KPSCH+++ +AN A R+P G+ NII+ G +D AVR + IGF+ +C G+ G++L Sbjct: 122 GNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.078e-31 Identity = 85/244 (34.84%), Postives = 119/244 (48.77%), Query Frame = 2 Query: 8 TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSP-YC---NLNYPC-RGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDC 721 T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P+FG +G+ REIAAFFA HET +C+I EI PS YC + +PC GK YYGRGP+Q++WN+NY A PVL+F++A+W+W + H+ G+G T ING +EC AV NR+ ++ FC +FG+ PG NL C Sbjct: 63 TNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.989e-31 Identity = 85/242 (35.12%), Postives = 111/242 (45.87%), Query Frame = 2 Query: 5 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWR-DAPGGEYAWGYCFISEISPPSPYCNLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDC 721 G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ REIAAFFA HETT + G+ YC + + YPC KYYGRGP+QL+WNYNY ATD SFK+A+WFWMT + H V+ G+G TT ING +EC D +RI F+ +C FG+ PG NL C Sbjct: 81 GGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAA--------QYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT------NVHSVMNQ---------------GFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 9.128e-31 Identity = 82/246 (33.33%), Postives = 114/246 (46.34%), Query Frame = 2 Query: 2 GGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC---NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRN-RIGFFSTFCGKFGIQPGYNLDC 721 GG+ G + +++ F + C + FYT AF+ A A+P F + G E REIAAFFA HET +C+ISEI+ + YC N +PC KYYGRGP+Q++WNYNY A D V++FK+A+WFWM N+V+ G+G T ING +EC G N A N R+G++ +C + + PG NL C Sbjct: 73 GGSGGANVANVVTDAFFNGIKNQAGS-GCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALEC-NGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of FC872615 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.530e-30 Identity = 82/248 (33.06%), Postives = 117/248 (47.18%), Query Frame = 2 Query: 2 GGTDGG--ELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN---LNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGWNDAVRN-RIGFFSTFCGKFGIQPGYNLDC 721 GG+ GG + +++ F + C + FYT AF+ A K +P F + G++ REIAAFFA HET +C+ISEI+ + YC+ +PC KYYGRGP+Q++WNYNY A D V++FK+A+WFWM S H V+ G+G TT + +ECG G N A N R+G++ +C + G+ PG NL C Sbjct: 60 GGSGGGGANVASVVTSSFFNGIKNQAGS-GCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269 The following BLAST results are available for this feature:
BLAST of FC872615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872615 ID=FC872615; Name=FC872615; organism=Citrus clementina; type=EST; length=946bpback to top |