FC872634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_PYRKO (Translation initiation factor 2 subunit beta OS=Pyrococcus kodakaraensis GN=eif2b PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.487e-20 Identity = 50/133 (37.59%), Postives = 83/133 (62.41%), Query Frame = 3 Query: 348 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGS 746 Y++E+LL + + L EN + R + P QV G + T+ NF+D+ + M+R P+H++ F+L E+ T+G+L+G+ R +++GRF P +++Y+ E+VIC C SPDT + K R FL+CE CG+ Sbjct: 8 YDFEKLLDKAYEELPEN---VKHHHSRFEVPPAQVTIAGNR-TIIENFVDIAEAMNRDPNHLLKFILREVATAGTLEGR-RAILQGRFTPYLIANKMKKYLKEFVICPVCGSPDTKIIKKGRFHFLKCEACGA 135
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_METTP (Translation initiation factor 2 subunit beta OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=eIF2B PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.312e-20 Identity = 52/124 (41.94%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 402 PELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPIKA 773 P G + R + P++ EG K TV NF + ++R PDH+M FLL ELGT+G ++G R V +G+F + + + YV+EYVIC CK PDT L K +R+ L+C+ CG+ R V KA Sbjct: 16 PAAKGTKERFQIPVPRIFYEG-KTTVLDNFAAIADALNRDPDHLMKFLLQELGTAGKIEGH-RGVFQGKFTEQAIQNQIAAYVDEYVICSECKLPDTHLIKSDRVLMLKCDACGAHRPVKKRKA 137
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_METMA (Translation initiation factor 2 subunit beta OS=Methanosarcina mazei GN=eif2b PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20 Identity = 53/137 (38.69%), Postives = 80/137 (58.39%), Query Frame = 3 Query: 348 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSV 758 Y+YEELL R + + P+ R V+ P++ EG K T+ NF ++ T++R PDH+M +L ELGT+G ++G R V +GRF ++ YV+EYV+C C PDT L + +R+ L+C CG+ R V Sbjct: 2 YDYEELLNRAMSKM----PDTETTDARFVIPEPKLFSEG-KTTILDNFGNIADTLNRDPDHLMKYLTRELGTAGKIEGT-RAVFQGRFTRAQLSDNIQAYVDEYVMCSECGRPDTQLVRVDRVLVLKCSACGAHRPV 132
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_METB6 (Translation initiation factor 2 subunit beta OS=Methanoregula boonei (strain 6A8) GN=eIF2B PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20 Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 354 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPIKA 773 YE LL + ++ + E + R V+ + EG K T+ NF ++ T+ R DH+M ++L ELGTSG ++G R + G+F I++ YV++YVIC C PDT L KD+R+ LRC+ CG R V KA Sbjct: 5 YENLLKKAYSHISEKS----ASSERFVVPEAKAYVEG-KTTILENFAEIADTVRRDKDHLMKYMLGELGTSGKIEGN-RAIFNGKFEISQIRMIIKSYVDDYVICSECGKPDTRLVKDDRVLLLRCDACGGHRPVRKRKA 138
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_METAC (Translation initiation factor 2 subunit beta OS=Methanosarcina acetivorans GN=eif2b PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.259e-19 Identity = 53/137 (38.69%), Postives = 79/137 (57.66%), Query Frame = 3 Query: 348 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSV 758 Y+YEELL R + P+ R V+ P++ EG K T+ NF ++ T++R PDH+M +L ELGT+G ++G R V +GRF ++ YV+EYV+C C PDT L + +R+ L+C CG+ R V Sbjct: 2 YDYEELLNRAMAKM----PDTETTDARFVIPEPKLFSEG-KTTILDNFGNIADTLNRDPDHLMKYLTRELGTAGKIEGT-RAVFQGRFTRAQISDNIQAYVDEYVMCSECGRPDTQLVRVDRVLVLKCSACGAHRPV 132
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_HALMA (Translation initiation factor 2 subunit beta OS=Haloarcula marismortui GN=eif2B PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.147e-19 Identity = 50/132 (37.88%), Postives = 71/132 (53.79%), Query Frame = 3 Query: 351 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGS 746 EY+++L R E PE+ G R + P + +EG TV+ NF C + R+ DHVM FL +LGTSG +D R+ + G F E + YV+E+V+C C PDT L ++ LRCE CG+ Sbjct: 2 EYDDMLDRAM----EETPEIDGTSERFEVPDPDIRQEGNV-TVYENFQSTCSRLGREDDHVMKFLQNDLGTSGHIDESGRVRLTGEFDATRIEASIDEYVDEFVLCSECGLPDTQLEREQGALLLRCEACGA 128
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_METMJ (Translation initiation factor 2 subunit beta OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eIF2B PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.178e-17 Identity = 54/140 (38.57%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 354 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPIKA 773 YE+LL + + + E P DR + + EG K TV NF ++ T+ R+ DH+M LL ELGT+G ++G R V G+F + I++ YV++YVIC C PDT L K R+ L+C+ CG R V KA Sbjct: 5 YEDLLKKAYTNITE--PTEFEDR--FTVPTARAFIEG-KTTVLENFAEIASTLRREQDHLMKHLLGELGTAGKVEGT-RAVFSGKFEQEQINTIIKGYVDDYVICSECGKPDTRLVKTERVLTLKCDACGGHRPVRKRKA 138
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_NATPD (Translation initiation factor 2 subunit beta OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eIF2B PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17 Identity = 53/131 (40.46%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 354 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGS 746 YEE L R E P++ G R + P V +EG TV+ NF + R+ HVM FL ELGTS ++D + RL + G F E + YV YVIC C PDT L K+N LRCE CG+ Sbjct: 3 YEEQLDRAL----EETPDIEGTAARFSVPDPDVRQEGNA-TVYENFQPTIDRLDREESHVMKFLQNELGTSANIDERGRLRLTGEFRQARVEEAINDYVEGYVICPECGLPDTRLEKENGAEVLRCEACGA 128
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_METS3 (Translation initiation factor 2 subunit beta OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=eIF2B PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17 Identity = 49/139 (35.25%), Postives = 79/139 (56.83%), Query Frame = 3 Query: 351 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPI 767 EYE LL R + L PE+ +R + + ++ +T NF D+ + ++R P HV+ FLL ELGT+G+L+G R +++G+F L YV +YVIC C PDT + +++R+F L+C CG+ + P+ Sbjct: 3 EYENLLNRAIDQLP---PEVFEHKRFKIPKAYSDIQGN--RTFIKNFKDVAEDLNRDPQHVLKFLLRELGTAGNLEGS-RAILQGKFTHYLINERLEDYVEKYVICHECNRPDTKIIREDRIFILKCAACGAKAPLKPL 135
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_METST (Translation initiation factor 2 subunit beta OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif2b PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.635e-17 Identity = 46/141 (32.62%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 351 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPIKA 773 EYE+LL + + E P+ + +R + + +G + T+ NF D+ +T++R P HV+ +LL ELGTSG+++G R +++G+F ++ YV+ +V+C C PDT++ +++R+ L+C CG+ AP+K+ Sbjct: 10 EYEKLLDQAY----EQLPDKIFEAKRFKVPKGYSVIQGNR-TIIKNFGDVSRTLNRDPQHVLKYLLRELGTSGNVEG-NRAILQGKFTHYVINDRVKEYVDNFVMCHECNRPDTVIIREDRIDMLKCSACGAR---APLKS 141 The following BLAST results are available for this feature:
BLAST of FC872634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872634 ID=FC872634; Name=FC872634; organism=Citrus clementina; type=EST; length=808bpback to top |