FC872634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_SULIA (Translation initiation factor 2 subunit beta OS=Sulfolobus islandicus (strain M.16.27) GN=eIF2B PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14 Identity = 41/139 (29.50%), Postives = 74/139 (53.24%), Query Frame = 3 Query: 351 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPI 767 EY E+L R+++ L E G + T P ++ T+ NF + C + R+ M +LL EL G++D + L+++G+F+ + ++ R++ YV C CKS DT+L K+ + +++ C CG+ V P+ Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQALPNLIIFNIGNTTMIRNFAEYCDRIRREDKICMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVLKKEKKSWYIVCLACGAQTPVKPL 139
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_THEAC (Translation initiation factor 2 subunit beta OS=Thermoplasma acidophilum GN=eif2b PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.716e-14 Identity = 42/140 (30.00%), Postives = 75/140 (53.57%), Query Frame = 3 Query: 351 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPIK 770 +YE+LL + N+L + + R + P+++REG K T+ NF D+ ++R P+H++ FL E GT+ +G+ RL++ + + + Y+N YV C C S DT + K R+ L C+ CG+ + ++ Sbjct: 4 DYEKLLEKAKNVLSSSTKNID----RLKIPDPEIIREG-KATIIRNFQDIVDIINRDPEHIIKFLTREFGTNIVQNGR-RLIINRKLTLEELLDKMNEYINTYVRCYECGSLDTEIQKSGRISLLVCKACGAQHPIHSVR 137
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_THEVO (Translation initiation factor 2 subunit beta OS=Thermoplasma volcanium GN=eif2b PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14 Identity = 43/139 (30.94%), Postives = 75/139 (53.96%), Query Frame = 3 Query: 354 YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPIK 770 Y++LL + ++L + + R + P+++REG K T+ NF D+ ++R PD V+ FL ELGT+ +G+ RL++ + + + + Y+N YV C C S DT + K R+ L C+ CG+ + +K Sbjct: 5 YDKLLEKAKDVLSSSTKNID----RLKIPEPEIIREG-KATIIRNFQDIIDIINRDPDQVIKFLTRELGTNIVQNGR-RLIINKKVTLEELQEKMNEYINTYVRCYECGSLDTEIQKSGRVSLLVCKACGAQHPIHTVK 137
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_METS5 (Translation initiation factor 2 subunit beta OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eif2b PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.032e-13 Identity = 44/144 (30.56%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 336 SDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPI 767 S+RD Y LL R++ L + +LA + T P + T+ NF + C + R+ M +LL EL +GS+ +L+++G+F+ + R++ YV C CKS DT+L KD ++++++C CG+ V P+ Sbjct: 2 SERDKLYHVLLDRLYAKLPKK--DLASE---TQTLPTLSIINVGNTTIIRNFSEYCDRIRREDKICMRYLLKELAAAGSISENGQLMIQGKFSNAIVNTFMDRFLKTYVQCSTCKSLDTVLVKDKKIWYIQCLACGAKNPVKPL 140
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_SULAC (Translation initiation factor 2 subunit beta OS=Sulfolobus acidocaldarius GN=eif2b PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.141e-12 Identity = 40/134 (29.85%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 345 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGS 746 D YE+LL R+++ L + + +G + P ++ + T+ NF + C + R+ M +LL EL GSL +LV++G+F+ + ++ R++ YV C C+S DTIL +D +++ + C CG+ Sbjct: 6 DKNYEQLLDRLYDRLPDK-AQKSGQQNL----PNLIVLQVGNTTIIRNFSEYCDRIRREDKLCMRYLLKELAAPGSLGENGQLVIQGKFSSQVVTMLMERFLKMYVQCSTCRSFDTILKRDKKVWIISCLACGA 134
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_PYRAE (Translation initiation factor 2 subunit beta OS=Pyrobaculum aerophilum GN=eif2b PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.946e-12 Identity = 43/141 (30.50%), Postives = 67/141 (47.52%), Query Frame = 3 Query: 345 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPI 767 D EY LL R + ++ A +R P + +KT+ NF + K ++R + F EL G+L+G + G +PK E + R++ YV+C C S DT L K+ R+F +RC CG+ V P+ Sbjct: 2 DSEYAALLERAYKLV-------APKAQRRAEIPKIEVENMPRKTIIPNFGQIAKRLNRDVYFMAKFFQKELAVPGTLEGDV-FTLHGEKSPKVVEAVYDRFIRYYVVCPVCNSIDTELRKEGRIFIMRCLACGASTPVRPL 134
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_STAMF (Translation initiation factor 2 subunit beta OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eif2b PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.336e-12 Identity = 41/135 (30.37%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 342 RDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGS 746 RDY++EELL R ++ L P + + +V+ G K T+ +NF + ++R P + + + ELG ++ +L+++GRF+ ++ +V +YVIC C S T L K ++F L+CE CG+ Sbjct: 6 RDYKFEELLERAYSKL----PARTVSKETFEVPRAEVMFVGGK-TLILNFKQITDVINRDPKILQRYFVKELGVPAYMNESGQLILQGRFSSHVINRLIDLFVKKYVICPTCGSRFTKLIKKGKVFILKCEACGA 135
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_THENV (Translation initiation factor 2 subunit beta OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=eIF2B PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.648e-11 Identity = 41/141 (29.08%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 345 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPI 767 D EY LL R + ++ A +R P ++ +KTV NF + K ++R + F EL G+++G + G +PK E + R++ YV+C C S DT L ++ R++ +RC CG+ V P+ Sbjct: 2 DEEYIALLDRAYKLV-------APKAQRRAEIPKIEVQNMPRKTVIPNFGQIAKRLNRDIYFMAKFFQRELAVPGTVEGDV-FTLHGEKSPKVVEAVYERFIRYYVVCPVCNSIDTELRREGRIYVMRCLACGASTPVKPL 134
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_PYRIL (Translation initiation factor 2 subunit beta OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=eIF2B PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11 Identity = 39/141 (27.66%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 345 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPI 767 D EY LL R + ++ A +R P ++ +KT+ NF + K ++R + F EL G+++G + G +PK E + R++ YV+C C S DT L ++ R++ ++C CG+ V P+ Sbjct: 2 DEEYLALLERAYKLV-------APKAQRRAEIPKIEVQNMPRKTIIPNFGQIAKRLNRDVYFMAKFFQKELAVPGTIEGDV-FTLHGEKSPKVVEAVYERFIRYYVVCPVCNSIDTELKREGRIYVMKCLACGASTPVRPL 134
BLAST of FC872634 vs. ExPASy Swiss-Prot
Match: IF2B_PYRAR (Translation initiation factor 2 subunit beta OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=eIF2B PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11 Identity = 43/141 (30.50%), Postives = 69/141 (48.94%), Query Frame = 3 Query: 345 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKDNRLFFLRCEKCGSGRSVAPI 767 D EY LL R + ++ +RRT + QV +KT+ NF + K ++R + F EL G+++G + G +PK E + R++ YV+C C S DT L K+ R+F ++C CG+ V P+ Sbjct: 2 DKEYLALLERAYTLVAPKA------QRRTEIPKIQV-ENMPRKTIIPNFGAIAKRLNRDIYFMAKFFQKELAVPGTVEGDV-FTLHGEKSPKVVEAVYERFIRYYVVCPVCNSIDTELRKEGRVFVMKCLACGASTPVKPL 134 The following BLAST results are available for this feature:
BLAST of FC872634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872634 ID=FC872634; Name=FC872634; organism=Citrus clementina; type=EST; length=808bpback to top |