FC872636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 9.079e-19 Identity = 71/214 (33.18%), Postives = 105/214 (49.07%), Query Frame = 3 Query: 246 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG------DGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 RA ++EFVAT +F++ +V G+ K T+G + +A A + A V + SGGH+NPAVTFG+ + R++S A Y Q LGA+ +++ + GG M G++ G L E+V TF LVYTV+ +A D + D +APL IG LA P G +NP+R+ G AL+ W W+ Sbjct: 29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLR--------LASGG--MRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD-----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALV---GWNWRHHWV 224
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.549e-18 Identity = 73/222 (32.88%), Postives = 110/222 (49.55%), Query Frame = 3 Query: 207 LFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 ++ PG L +A +AEF++T +F++ + M SK +T G+ A A +F V A ISGGH+NPAVTFG F+ ++L + Y I Q LG+ +++ L G L+ G S + L EIV TF LVYTV+ +A D K+ + + +AP+ IGF V L G +NP+ S G AL+ +W+ W+ Sbjct: 14 VYHPGAL------KAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGG----LATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWV 217
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.549e-18 Identity = 60/175 (34.29%), Postives = 90/175 (51.43%), Query Frame = 3 Query: 345 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANM-LSKGYSKGDGLGA--------------EIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAAL 824 +G+ G++ AFG + + Y ISG H+NPAVT GL + + Y+I Q LGAI AA++ Y + G A L+KG++ +G GA E+V T + ++ + +T K A APL IG A+ ++HL +IP+T T +NP+RS G AL Sbjct: 35 IGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALL-------YLIASGAAGFDLAKGFA-SNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGSTHGKAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPAL 195
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 69/209 (33.01%), Postives = 105/209 (50.24%), Query Frame = 3 Query: 246 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 RA +AEF++T +F++ + + +K +T G+ A A +F V A ISGGH+NPAVTFG+ L ++L + Y I Q LG++ A + F + G LS G + L EIV TF LVYTV+ +A D K + + +AP+ IGF V LA +G +NP+ + G A++ W + W+ Sbjct: 22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSV-AACFLLSFATGGEPIPAFG---LSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWV 219
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.450e-18 Identity = 66/214 (30.84%), Postives = 101/214 (47.20%), Query Frame = 3 Query: 222 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 E+ + F+R+ I+E +A+F++++I GV S S + A A G + L C ISG HINPAVT L + R +S A Y+ QC G I GAA++ G Y+ A S + + G E + TF++V F +TD + + + IG A ++P +NP+RSLG + + NK WD W+ Sbjct: 58 EIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV--LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGN-----SAASIGCAYSACCFVSMPY----LNPARSLGPSFVLNK---WDSHWV 257
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.885e-18 Identity = 66/218 (30.28%), Postives = 96/218 (44.04%), Query Frame = 3 Query: 255 IAEFVATFLFLY------ITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLS---------KGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 IAEF+ TF + + + + +G G+A AFG +F Y ISGGH NPAV+FGL++ ++ + Y+ Q LGAI + + + G+N L+ +GY L E V TF+ + + TD A AP IG A+ L+HL +IPIT T +NP+RS G AL W+ Sbjct: 5 IAEFIGTFWLVLGGCGSAVFAAFIAAPGGGNTNEFGLGYLGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWL 216
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.686e-18 Identity = 67/207 (32.37%), Postives = 101/207 (48.79%), Query Frame = 3 Query: 246 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSA-TDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 +A I EF+ TFLF++ V + M + VG+ +A A + A++ ISGGH+NPAVT GL L +S+ A Y I Q L + ++ +G + L+ G S G+ EI+ TF L++TV++ D K+ + D P+L GF V LA +G +NP+RS G AL+ W D W+ Sbjct: 19 KALIVEFITTFLFVFAGVGSAMATDSLVGN-TLVGLFAVAVAHA-FVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGG----MGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWV 212
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 1.004e-17 Identity = 72/226 (31.86%), Postives = 104/226 (46.02%), Query Frame = 3 Query: 246 RAGIAEFVATFLFLYI----TVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQ--------YEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNA----RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALI----YNKDQAWDDPWI 863 RA AEF +TFLF++I T+ M S S++ +A AFG +FA V+ A +SGGH+NPAVTF + +++ +A+FY Q LG+ V+ Q EM G GA +L E V TF++VYTV A D + + L L +G LA +TG +NP+RS G A++ N+ W P + Sbjct: 18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGIL------------EGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMV 229
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.004e-17 Identity = 57/181 (31.49%), Postives = 86/181 (47.51%), Query Frame = 3 Query: 345 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVV-------KGFQKSQYEMLGGGANMLSK-GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 +G+ G++ AFG + + + ISG H+NPAVT GL+ + V Y++ Q +G + V+ GF + G S GYS L E+V T + + + ATD + AP+ IG + L+HL +IP+T T +NP+RS G AL Y D A W+ Sbjct: 33 IGLLGVSLAFGLTVLTMAFAIGHISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEVVMTMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVAL-YVGDWATAQLWL 206
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.921e-17 Identity = 71/222 (31.98%), Postives = 104/222 (46.85%), Query Frame = 3 Query: 207 LFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 ++ PG L +A AEF++T +F++ + M SK T G+ A A +F V A ISGGH+NPAVTFG F+ ++L + Y + Q LG+ +++ Q G G S + L EIV TF LVYTV+ +A D K+ + + +AP+ IGF V L G +NP+ S G AL+ W W+ Sbjct: 14 VYHPGAL------KAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFG-----LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWEWGYQWV 217 The following BLAST results are available for this feature:
BLAST of FC872636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872636 ID=FC872636; Name=FC872636; organism=Citrus clementina; type=EST; length=864bpback to top |