FC872636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21 Identity = 72/214 (33.64%), Postives = 106/214 (49.53%), Query Frame = 3 Query: 246 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLG------AEIVGTFVLVYTVFSAT-DAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 RA I+EF+AT +F++ +V+ + K ST G + +A A + V ISGGH+NPAVTFG + ++SL AV Y + Q LGA+ +++ + GG M G++ G+G E V TF L+Y ++ D KR HV +APL +GF + LA P G G+NP+R G AL+ W W+ Sbjct: 26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLR--------LATGG--MRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWV 222
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21 Identity = 60/166 (36.14%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 345 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGG------ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAAL 824 +G G+A AFG + + Y GISGGH NPAV+ GL +A +L + Y + Q LGAI AA++ + GG + GYS GL EI+ T + + +T + A AP+ IGF + L+HL +IP+T T +NP+RS G AL Sbjct: 34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVAL 193
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21 Identity = 69/206 (33.50%), Postives = 109/206 (52.91%), Query Frame = 3 Query: 219 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALI 827 G+ S +A +AEF+AT LF++ V + + +K + + G+ +A A +F V A ISGGH+NPAVT GL + +++ T FY I Q LG+ ++K L + ++ G + G+ EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V LA P +G +NP+RS G A++ Sbjct: 10 GDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNG----LAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 207
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21 Identity = 74/205 (36.10%), Postives = 110/205 (53.66%), Query Frame = 3 Query: 219 GELSSWSFYRAGIAEFVATFLFLYITVLTVM--GVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAAL 824 G+ S + +A +AEF+AT LF++ V + + G + G+ IA A +F V A ISGGH+NPAVTFGL + +++ T VFY + Q LGA A ++ GF + G S+ +G+ E+V TF LVYTV+ +A D K+ + + +AP+ IGF V LA P +G +NP+RS G A+ Sbjct: 10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGFVTHGKAI----PTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.354e-21 Identity = 69/206 (33.50%), Postives = 109/206 (52.91%), Query Frame = 3 Query: 219 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALI 827 G+ S +A +AEF+AT LF++ V + + +K + + G+ +A A +F V A ISGGH+NPAVT GL + +++ T FY I Q LG+ ++K L + ++ G + G+ EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V LA P +G +NP+RS G A++ Sbjct: 10 GDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNG----LAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 207
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.354e-21 Identity = 72/203 (35.47%), Postives = 103/203 (50.74%), Query Frame = 3 Query: 222 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALI 827 EL S SF+RA AEF AT +++ + S + + + +A AFG + LV ISG H+NPAVTF + ++SL A Y+ Q LGA+ GAAV+ + + + G A N L G S G EI T V +F+ D +RN R V L +GF++ L HL + TG G+NP+RS A++ Sbjct: 1 ELRSASFWRAIFAEFFATLFYVFFGL-----GSSLRWAPGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 192
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.354e-21 Identity = 73/203 (35.96%), Postives = 104/203 (51.23%), Query Frame = 3 Query: 222 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALI 827 EL S SF+RA AEF AT +++ +G S + + + +A AFG + LV ISG H+NPAVTF + ++SL A Y+ Q LGA+ GAAV+ + + + G A N L G S G EI T V +F+ D +RN R V L +GF++ L HL + TG G+NP+RS A++ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21 Identity = 70/196 (35.71%), Postives = 104/196 (53.06%), Query Frame = 3 Query: 246 RAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAAL 824 +A +AEF+AT LF++ V + + S+ G+ IA A +F V A ISGGH+NPAVTFGL + +++ T + Y + Q LGA +++ Q G G S+ +G+ EIV TF LVYTV+ +A D K+ + + +AP+ IGF V LA P +G +NP+RS G A+ Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHG-----VSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.700e-21 Identity = 70/214 (32.71%), Postives = 108/214 (50.47%), Query Frame = 3 Query: 246 RAGIAEFVATFLFLYITVLTVMGVSK-------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSA-TDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 RA +AEF++TF+F++ +++ + K + G+ +A A +FA V +SGGH+NPAVTFG + +++ A++Y I Q LGAI +++ + L+ G +GL EI+ TF LVY V+S D KR + + I+APL IG V L P +G +NP+R+ G AL+ W D WI Sbjct: 24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPV----GFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALV---GWRWHDHWI 226
BLAST of FC872636 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20 Identity = 70/215 (32.56%), Postives = 104/215 (48.37%), Query Frame = 3 Query: 246 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV----GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGAN----MLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWI 863 RA I+EF+AT +F++ +V+ + K ST+ G+ +A A + V +SGGH+NPAVTFG + ++SL AV Y Q LGA+ +++ + GGA L+ G G + E V TF VY + + D KR H+ +APL +GF + LA P G G+NP+R G AL+ W W+ Sbjct: 28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLR--------LATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWV 227 The following BLAST results are available for this feature:
BLAST of FC872636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872636 ID=FC872636; Name=FC872636; organism=Citrus clementina; type=EST; length=864bpback to top |