FC872638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FBRL_NEUCR (rRNA 2'-O-methyltransferase fibrillarin OS=Neurospora crassa GN=nop-1 PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 5.674e-36 Identity = 74/106 (69.81%), Postives = 88/106 (83.02%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACV 328 A +RTNVIPI+EDAR P YRML+ MVDVIF+DVAQPDQARI+ +NA FLK GG +ISIKA+CIDST P E VF SEV+KL++D+F P EQ+TLEP+ERDHA V Sbjct: 206 ATRRTNVIPIVEDARKPMAYRMLLPMVDVIFADVAQPDQARIVGINAKLFLKQGGGLLISIKASCIDSTAPPEQVFASEVQKLREDKFFPKEQLTLEPYERDHAMV 311
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FBRL_ENCCU (rRNA 2'-O-methyltransferase fibrillarin OS=Encephalitozoon cuniculi GN=NOP1 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.410e-36 Identity = 69/115 (60.00%), Postives = 92/115 (80.00%), Query Frame = 2 Query: 17 KRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRMPKKQK 361 KR N++PIIEDAR+P++YRMLV +VD IFSDV+QPDQ RI+ALNA YFLK GG +SIKANC++S VPAE VF EV L+++ +P EQVTLEPFE+DHA ++G +++ ++ Sbjct: 168 KRPNIVPIIEDARYPSRYRMLVPIVDCIFSDVSQPDQTRIVALNAQYFLKEGGGVDVSIKANCVNSAVPAETVFADEVNILRKNSIRPKEQVTLEPFEKDHAMIIGRFKLSASEE 282
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FBRL_GIALA (rRNA 2'-O-methyltransferase fibrillarin OS=Giardia lamblia PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.599e-30 Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRM 346 AK RTNV PII DARHP KYRM+V VD IFSDVAQPDQARI+A NA Y+LKA G +ISIKA+ +DST+ EAVF E++ L++ FK EQ+ + F R+HA VVG +R+ Sbjct: 213 AKARTNVYPIIADARHPYKYRMIVPEVDCIFSDVAQPDQARIVAENARYYLKANGGMLISIKASSVDSTLKPEAVFAREIETLREHDFKCKEQLDIGEFHRNHAIVVGRFRV 324
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_METKA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanopyrus kandleri GN=flpA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.508e-23 Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 2 Query: 5 PGAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGY 340 P +KR N+IPI+ DA P Y LV VDVI+ D+AQP QA ++A NA FL+ GG+ +++IKA ID T E VF+ E +KL++ F+ E + LEP+ERDH +V Y Sbjct: 119 PVCEKRPNMIPILGDATKPHGYAPLVEQVDVIYQDIAQPKQAEVVADNAEAFLRPGGYVIVAIKARSIDVTKEPEEVFEDEERKLEERGFEVLEVIDLEPYERDHVGIVAEY 230
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_THESM (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=flpA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.603e-22 Identity = 55/109 (50.46%), Postives = 77/109 (70.64%), Query Frame = 2 Query: 5 PGAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 P ++R N++PI+ DA P +YR LV VDVIF DVAQP QA+IL NA +LK+GG+ +ISIK+ ID T E VF+ EV+K + F+ E+++LEP+E+DHA +V Sbjct: 115 PLVEERRNIVPILGDATKPEEYRALVTKVDVIFEDVAQPTQAKILIDNAKAYLKSGGYGMISIKSRSIDVTKEPEEVFR-EVEKELSEYFEVVERISLEPYEKDHALIV 222
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_PYRAE (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum aerophilum GN=flpA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.039e-21 Identity = 54/108 (50.00%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 20 RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 R NV+PI+ DAR P +Y V VDV++ DVAQP QA+ILA NA YFLK GGH ++ IKA ID T PA F+ E+ L++ F E V LEP++ HA V+ R Sbjct: 128 RRNVVPILGDARFPYQYAHYVKGVDVVYIDVAQPAQAKILADNADYFLKPGGHVMLVIKAMSIDVTAPATETFKQEINTLKERGFDILETVHLEPYDTAHAMVIAKKR 235
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_SULIY (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=flpA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21 Identity = 44/111 (39.64%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G+ ++ IKA ID T + ++++EV+KL+ F+ + + L+P+++DHA V+ Y+ Sbjct: 121 AQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDHAIVLSRYK 231
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_SULIN (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=flpA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21 Identity = 44/111 (39.64%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G+ ++ IKA ID T + ++++EV+KL+ F+ + + L+P+++DHA V+ Y+ Sbjct: 121 AQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDHAIVLSRYK 231
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_SULIM (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=flpA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21 Identity = 44/111 (39.64%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G+ ++ IKA ID T + ++++EV+KL+ F+ + + L+P+++DHA V+ Y+ Sbjct: 121 AQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDHAIVLSRYK 231
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_SULIL (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=flpA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21 Identity = 44/111 (39.64%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G+ ++ IKA ID T + ++++EV+KL+ F+ + + L+P+++DHA V+ Y+ Sbjct: 121 AQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDHAIVLSRYK 231 The following BLAST results are available for this feature:
BLAST of FC872638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872638 ID=FC872638; Name=FC872638; organism=Citrus clementina; type=EST; length=601bpback to top |