FC872638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_SULIK (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=flpA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21 Identity = 44/111 (39.64%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G+ ++ IKA ID T + ++++EV+KL+ F+ + + L+P+++DHA V+ Y+ Sbjct: 121 AQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDHAIVLSRYK 231
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_SULIA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain M.16.27) GN=flpA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21 Identity = 44/111 (39.64%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G+ ++ IKA ID T + ++++EV+KL+ F+ + + L+P+++DHA V+ Y+ Sbjct: 121 AQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDHAIVLSRYK 231
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_THEON (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermococcus onnurineus (strain NA1) GN=flpA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.314e-21 Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 5 PGAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 P ++R N++PI+ DA P YR LV VDVIF DVAQP QA+IL NA FLK+GG+ +IS+K+ ID T E VF+ EV+K F+ E+++LEP+E+DHA V Sbjct: 115 PIVEERRNIVPILGDATKPEGYRALVPKVDVIFEDVAQPTQAKILIDNAKVFLKSGGYGMISVKSRSIDVTKEPEQVFK-EVEKELATYFEVVERLSLEPYEKDHALFV 222
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_SULTO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus tokodaii GN=flpA PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.314e-21 Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 A+ R N+ PI+ DAR P YR LV VDV++ D+AQPD+ I NA +FLK GG+ +++IKA ID T +++ EV KL+++ F + + L+P+++DHA V+ Y+ Sbjct: 121 AQHRPNLFPILADARFPQYYRTLVEDVDVLYVDIAQPDETDIAIYNAKFFLKNGGYMMMAIKARSIDVTKEPTEIYEMEVNKLKENNFDVIQVIQLDPYDKDHAMVLAKYK 231
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_SULSO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus solfataricus GN=flpA PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.022e-21 Identity = 44/111 (39.64%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 11 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 A++R N+ P++ DAR P Y+ +V VDV++ D+AQPDQ I NA +FLK G ++ IKA ID T + ++++EV+KL+ F+ + + L+P+++DHA V+ Y+ Sbjct: 121 AQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKYK 231
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_STAMF (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=flpA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.022e-21 Identity = 49/108 (45.37%), Postives = 73/108 (67.59%), Query Frame = 2 Query: 20 RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 R N+ PI+ DAR P +YR LV MVD I++D+AQP+QA I+A NA YFLK G+ +++IKA ID T +++ E+ L++ F+ + V LEP+++DHA V Y+ Sbjct: 125 RKNLYPILGDARKPKEYRHLVEMVDGIYADIAQPEQAAIVADNADYFLKDNGYLLLAIKARSIDVTKEPSEIYRREINTLKERGFEIIDVVHLEPYDKDHAMVYARYK 232
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_METVO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus voltae GN=flpA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.022e-21 Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 20 RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 334 R N+ PI+ DA P +Y +V VDVIF DVAQP+QA IL NA +FLK GG+ +ISIKA +D T +F+++ + ++Q+ FK + + +EPFE+DH VG Sbjct: 119 RKNLFPILGDANKPEEYANIVEKVDVIFEDVAQPNQAEILIKNAKWFLKKGGYGMISIKARSVDVTENPRVIFEAQKEIMEQNGFKIVDAINIEPFEKDHMLFVG 223
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_THEGJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=flpA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21 Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 5 PGAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 P ++R N++PI+ DA P YR LV VDVIF DVAQP QA+IL NA FLK+GG+ +IS+K+ ID T E VF+ EV++ F+ E+++LEP+E+DHA V Sbjct: 115 PIVEERRNIVPILGDATKPEGYRALVPKVDVIFEDVAQPTQAKILIDNAKVFLKSGGYGMISVKSRSIDVTKEPEEVFK-EVERELASYFEVVERLSLEPYEKDHALFV 222
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_PYRKO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrococcus kodakaraensis GN=flpA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21 Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 5 PGAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 P ++R N++PI+ DA P YR LV VDVIF DVAQP QA+IL NA +LK+GG+ +IS+K+ ID T E VF+ EV+K F+ E+++LEP+E+DHA V Sbjct: 115 PLVEERRNIVPILGDATKPEGYRALVPKVDVIFEDVAQPTQAKILIDNAKVYLKSGGYGMISVKSRSIDVTKEPEQVFK-EVEKELSTYFEVVERLSLEPYEKDHALFV 222
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_PYRIL (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=flpA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21 Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 2 Query: 20 RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 R NV+PI+ DAR P +Y V VDV++ DVAQP QA+ILA NA YFLK GG+ ++ IKA ID T PA F+ E+ L++ F+ E V LEP++ HA V+ Sbjct: 128 RRNVVPILGDARFPYQYAHYVKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGFEILETVHLEPYDTAHAMVI 231 The following BLAST results are available for this feature:
BLAST of FC872638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872638 ID=FC872638; Name=FC872638; organism=Citrus clementina; type=EST; length=601bpback to top |