FC872638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_METJA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanocaldococcus jannaschii GN=flpA PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21 Identity = 50/106 (47.17%), Postives = 71/106 (66.98%), Query Frame = 2 Query: 17 KRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 334 +R N+IPI+ DA P +Y +V VDVI+ DVAQP+QA IL NA +FLK GG+ +I+IKA ID T + +F+ + + L+ FK ++V +EPFE+DH VG Sbjct: 120 ERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIEPFEKDHVMFVG 225
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_PYRCJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=flpA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21 Identity = 52/104 (50.00%), Postives = 68/104 (65.38%), Query Frame = 2 Query: 20 RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 R NVIPI+ DAR P +Y + VDV++ DVAQP QA+ILA NA YFLK GG+ ++ IKA ID T PA F+ E+ L++ F E V LEP++ HA V+ Sbjct: 128 RRNVIPILGDARFPYQYAHYIKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGFDVLETVHLEPYDTAHAMVI 231
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_PYRAB (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrococcus abyssi GN=flpA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21 Identity = 53/109 (48.62%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 5 PGAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 P + R N++PI+ DA P +YR LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID T E VF+ EV+K + F+ E++ LEP+E+DHA V Sbjct: 116 PIVEDRKNIVPILGDATKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKKGGYGMIAVKSRSIDVTKEPEQVFR-EVEKELSEYFEVIERLNLEPYEKDHALFV 223
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_THENV (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=flpA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.733e-21 Identity = 54/108 (50.00%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 20 RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 343 R NV+PI+ DAR P +Y V VDV + DVAQP QA+ILA NA YFLK GG+ ++ IKA ID T PA F+ E+ L++ F+ E V LEP++ HA VV R Sbjct: 128 RRNVVPILGDARFPYQYAHYVKGVDVAYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGFEILETVHLEPYDTAHAMVVARKR 235
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_PYRHO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrococcus horikoshii GN=flpA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.733e-21 Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 5 PGAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 P ++R N++PI+ DA P +YR LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID T E VF+ EV++ + F+ E++ LEP+E+DHA V Sbjct: 116 PIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFR-EVERELSEYFEVIERLNLEPYEKDHALFV 223
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_PYRFU (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrococcus furiosus GN=flpA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.733e-21 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 5 PGAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 P ++R N+IPI+ DA P +YR LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID T E VF+ EV++ + F+ E++ LEP+E+DHA V Sbjct: 116 PIVEERRNIIPILGDATKPEEYRALVTKVDVIFEDVAQPTQAKILIDNAKAYLKRGGYGMIAVKSRSIDVTKEPEQVFK-EVERELSEYFEVIERLNLEPYEKDHALFV 223
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_PYRAR (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=flpA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20 Identity = 50/104 (48.08%), Postives = 69/104 (66.35%), Query Frame = 2 Query: 20 RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 331 R NV+PI+ DAR P +Y + VDV++ DVAQP QA+ILA NA YFLK GG+ ++ IKA ID T PA F+ E+ L++ ++ E V LEP++ HA V+ Sbjct: 128 RRNVVPILGDARFPYQYAHYIKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGYEILETVHLEPYDTAHAMVI 231
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_METVS (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=flpA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20 Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 17 KRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 334 +R N+IPI+ DA P +Y +VG VDVIF DVAQP+QA IL NA +FL G+ +ISIKA ID T + +F + K L + F +++ +EPFE+DH VG Sbjct: 120 ERINLIPILGDANRPFEYSNIVGKVDVIFEDVAQPNQAEILVKNAKWFLNKDGYAMISIKARSIDVTKNPKEIFLEQKKILIEGGFDIVDEINIEPFEKDHIMFVG 225
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_METMP (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis GN=flpA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20 Identity = 49/106 (46.23%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 17 KRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 334 +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA +FLK G+ +ISIKA +D T +F + K L + F+ ++V +EPFE+DH +VG Sbjct: 120 ERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNAKWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVDEVNIEPFEKDHMMMVG 225
BLAST of FC872638 vs. ExPASy Swiss-Prot
Match: FLPA_METM6 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=flpA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20 Identity = 49/106 (46.23%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 17 KRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 334 +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA +FLK G+ +ISIKA +D T +F + K L + F+ ++V +EPFE+DH +VG Sbjct: 120 ERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNAKWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVDEVNIEPFEKDHMMMVG 225 The following BLAST results are available for this feature:
BLAST of FC872638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872638 ID=FC872638; Name=FC872638; organism=Citrus clementina; type=EST; length=601bpback to top |