FC872639
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_BACHK (Ribose-5-phosphate isomerase A OS=Bacillus thuringiensis subsp. konkukian GN=rpiA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 35/111 (31.53%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGV 336 ++IVDESK+V LG +P+E++P+ WK T ++Q L GC LR + F+TDN N + + + GVVE G+F++M + I+ ++ G+ Sbjct: 113 IIIVDESKVVTRLGT--FPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIVDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGI 217
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_BACAN (Ribose-5-phosphate isomerase A OS=Bacillus anthracis GN=rpiA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 35/111 (31.53%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGV 336 ++IVDESK+V LG +P+E++P+ WK T ++Q L GC LR + F+TDN N + + + GVVE G+F++M + I+ ++ G+ Sbjct: 113 IIIVDESKVVTRLGT--FPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIIDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGI 217
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_BACCZ (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ZK / E33L) GN=rpiA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGV 336 ++I+DESK+V LG +P+E++P+ WK T ++Q L GC LR + F+TDN N + + + GVVE G+F++M + I+ ++ G+ Sbjct: 113 IIIIDESKVVTRLGT--FPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIIDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGI 217
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_SYNJA (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11 Identity = 43/112 (38.39%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGE-QPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGV 336 ++I D SK V HLG + +PVEVV + WK T R++ L GC A LR T E P++TD +Y+ +A + + GVVEHG+F+ MAT I+A G+ Sbjct: 119 IIIADASKKVAHLG-TRFPVPVEVVRFGWKTTLARVEAL----GCQAVLRRTAEGDPYLTDEQHYILDCQFGPIANPAKLA-EQLKGTVGVVEHGLFIGMATEAIIAGPEGI 224
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_SPHAL (Ribose-5-phosphate isomerase A OS=Sphingopyxis alaskensis GN=rpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11 Identity = 42/115 (36.52%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGVTIRN 348 ++I D SKLV LG +PVEVVP+ +F RL L G +R G PF+TD GNY+ +A+ I + GV+EHG+FLD T+++A V +R+ Sbjct: 117 IIIADSSKLVAQLGK--FPLPVEVVPFATEFVRARLSAL----GARVTVREAGGTPFLTDQGNYILDAALDEIPRPREIAAA-ITTIPGVLEHGLFLDEIDTIMIARGDMVEVRH 224 The following BLAST results are available for this feature:
BLAST of FC872639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872639 ID=FC872639; Name=FC872639; organism=Citrus clementina; type=EST; length=765bpback to top |