FC872655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_THEP3 (50S ribosomal protein L11 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplK PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+E GS P +QKVGKIT EQLR IA K+ DLN + IE+AMR+IAGTA +MGI+I Sbjct: 84 GIESGSPQPNKQKVGKITREQLREIAEIKMKDLNASDIEAAMRMIAGTARSMGIEI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_PROMM (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplK PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 36/56 (64.29%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS + KVG ++ QL IA KLPDLNCTSIESAMRII GTA NMG+ I Sbjct: 84 GIEKGSGESAHGKVGSLSRSQLEEIAKTKLPDLNCTSIESAMRIIEGTARNMGVSI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_THETN (50S ribosomal protein L11 OS=Thermoanaerobacter tengcongensis GN=rplK PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+E GS P +QKVGKIT +QLR IA K+ DLN T IE+AMR+IAGTA +MGI+I Sbjct: 84 GIESGSPQPNKQKVGKITKQQLREIAEIKMRDLNTTDIEAAMRMIAGTARSMGIEI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNE7 (50S ribosomal protein L11 OS=Synechococcus elongatus (strain PCC 7942) GN=rplK PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+E+GS +P + KVGKIT QLR IA KLPDLN ++E+AMRI+ GTA NMG+ I Sbjct: 84 GIERGSGNPNKTKVGKITTAQLREIAETKLPDLNTKNVEAAMRIVEGTARNMGVTI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SULSY (50S ribosomal protein L11 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplK PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 G++ GS DPK+ KVGKIT+ QLR IA KL DLN IE AMR IAGTA +MGI+I+ Sbjct: 85 GIKTGSGDPKRNKVGKITVNQLREIAEMKLKDLNTEDIEMAMRTIAGTARSMGIEIE 141
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_CYAP8 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 8801) GN=rplK PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 GVE+GS P + KVG IT +QLR IA K+PDLN IE+AM+I+AGTA NMG+ I Sbjct: 84 GVERGSNQPNKTKVGSITQDQLREIAQTKMPDLNANDIEAAMKIVAGTARNMGVTI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_CYAP7 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7424) GN=rplK PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 GVE+GS +P ++ VG IT +QLR IA K+PDLN IE+AM+I+AGTA NMGI + Sbjct: 84 GVERGSNEPNKKNVGSITQDQLREIAQTKMPDLNANDIEAAMKIVAGTARNMGISV 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_GLOVI (50S ribosomal protein L11 OS=Gloeobacter violaceus GN=rplK PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 GVEKGS P ++K G IT QLR IA +KLPDLN +E+AM+IIAGTA NMGI I Sbjct: 84 GVEKGSGKPNKEKAGTITGAQLRQIAEQKLPDLNANDVEAAMKIIAGTARNMGIVI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_AQUAE (50S ribosomal protein L11 OS=Aquifex aeolicus GN=rplK PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12 Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 GVEKGS DPK+ KVGKIT++QL IA K+ D+N +++AMR +AGTA +MGI+I+ Sbjct: 85 GVEKGSSDPKRVKVGKITVKQLEEIAKMKMKDMNTRDLKAAMRTVAGTAKSMGIEIE 141
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNY3 (50S ribosomal protein L11 OS=Synechocystis sp. (strain PCC 6803) GN=rplK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12 Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 GVEKGS +P + KV IT EQLR IA KLPDLN I++AM II GTA NMGI ++ Sbjct: 84 GVEKGSSEPNKNKVASITREQLREIAQTKLPDLNANDIDAAMNIIEGTARNMGITVN 140 The following BLAST results are available for this feature:
BLAST of FC872655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872655 ID=FC872655; Name=FC872655; organism=Citrus clementina; type=EST; length=774bpback to top |