FC872655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_PROM5 (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12 Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS + + VG I+ QL IA KLPDLNCTSIESAM++I GTA NMGI I Sbjct: 84 GIEKGSGESSKGSVGNISKSQLEEIAKTKLPDLNCTSIESAMKVIEGTARNMGISI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_CLOB8 (50S ribosomal protein L11 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=rplK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 3 Query: 21 IGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 IG+E GS P + KVGK+T +QL+ IA K+PDLN S+ESAMR+IAGTA +MG+ I+ Sbjct: 83 IGLESGSGVPNKTKVGKLTQDQLKKIAETKMPDLNAASLESAMRMIAGTARSMGVTIE 140
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNP6 (50S ribosomal protein L11 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplK PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+E+GS +P + KVGKIT QLR IA KLPD N ++E+AMRI+ GTA NMG+ I Sbjct: 84 GIERGSGNPNKTKVGKITTAQLREIAETKLPDFNTKNVEAAMRIVEGTARNMGVTI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_TRIEI (50S ribosomal protein L11 OS=Trichodesmium erythraeum (strain IMS101) GN=rplK PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 GVE GS +P + KVG IT QL+ IA K+PDLN +IE+AM+I+AGTA NMGI I Sbjct: 84 GVESGSSEPNRTKVGSITQAQLQEIAQTKMPDLNANNIEAAMKIVAGTARNMGITI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_THESQ (50S ribosomal protein L11 OS=Thermotoga sp. (strain RQ2) GN=rplK PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS +PK++ VGK+T +Q+ IA K+PDLN S+E+AM+II GTA +MGI++ Sbjct: 84 GIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEV 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_THEMA (50S ribosomal protein L11 OS=Thermotoga maritima GN=rplK PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS +PK++ VGK+T +Q+ IA K+PDLN S+E+AM+II GTA +MGI++ Sbjct: 84 GIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEV 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNR3 (50S ribosomal protein L11 OS=Synechococcus sp. (strain RCC307) GN=rplK PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS + + VG IT QL IA KLPDLNC+S+ESAMRII GTA NMG+ + Sbjct: 84 GIEKGSGESAKGSVGSITRAQLEEIANTKLPDLNCSSVESAMRIIEGTARNMGVAV 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNPW (50S ribosomal protein L11 OS=Synechococcus sp. (strain WH7803) GN=rplK PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS + + VG I QL IA KLPDLNCTSIESAMRII GTA NMG+ I Sbjct: 84 GIEKGSGESAKGSVGSIKRSQLEEIAKTKLPDLNCTSIESAMRIIEGTARNMGVAI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_FRASC (50S ribosomal protein L11 OS=Frankia sp. (strain CcI3) GN=rplK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.997e-11 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 GVEKGS P + KV K+T Q+R IA KLPDLN TSIE+A +IIAGTA +MGI + Sbjct: 87 GVEKGSGTPHRDKVAKLTTAQIREIAQTKLPDLNATSIEAAEKIIAGTARSMGITV 142
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_THEP1 (50S ribosomal protein L11 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rplK PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11 Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS +PK++ VGK+T +Q+ IA K+PDLN S+E+AM+II GTA +MGI++ Sbjct: 84 GLEKGSSEPKRKIVGKVTRKQIEEIARTKMPDLNANSLEAAMKIIEGTAKSMGIEV 139 The following BLAST results are available for this feature:
BLAST of FC872655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872655 ID=FC872655; Name=FC872655; organism=Citrus clementina; type=EST; length=774bpback to top |