FC872655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNS9 (50S ribosomal protein L11 OS=Synechococcus sp. (strain CC9902) GN=rplK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS D + VG I+ QL IA KLPDLNC+S++SAMRII GTA NMG+ + Sbjct: 84 GIEKGSGDSAKGSVGSISRAQLEEIAKTKLPDLNCSSVDSAMRIIEGTARNMGVAV 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNS3 (50S ribosomal protein L11 OS=Synechococcus sp. (strain CC9311) GN=rplK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G++KGS + + VG I QL IA KLPDLNCTS+ESAMR+I GTA NMG+ I Sbjct: 84 GIQKGSGESAKGSVGSINRSQLEEIAKTKLPDLNCTSVESAMRVIEGTARNMGVAI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNP2 (50S ribosomal protein L11 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 GVEKGS P +QK G I+ QL+ IA K+PDLN IE+AM I+AGTA NMGI + Sbjct: 84 GVEKGSAQPNKQKAGSISRAQLQEIAQTKMPDLNANDIEAAMNIVAGTARNMGITV 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_GEOLS (50S ribosomal protein L11 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=rplK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 3 Query: 21 IGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 IG+E GS P + KVGK+T Q+ IA +K+PDLN S+E+AMR + GTA +MG+DI Sbjct: 83 IGIESGSSVPNKNKVGKLTKAQVEEIAKKKMPDLNAASVEAAMRTVEGTARSMGVDI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNPX (50S ribosomal protein L11 OS=Synechococcus sp. (strain WH8102) GN=rplK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 27 VEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 +EKGS + + VG I QL IA KLPDLNCTS+ESAMRII GTA NMG+ I Sbjct: 85 IEKGSGESAKGNVGSINRAQLEEIAKTKLPDLNCTSVESAMRIIEGTARNMGVSI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_STRAW (50S ribosomal protein L11 OS=Streptomyces avermitilis GN=rplK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 GVEKGS +P + KV KIT Q+R IAT KLPDLN +++A +IIAGTA +MGI ++ Sbjct: 87 GVEKGSGEPHKTKVAKITQAQVREIATTKLPDLNANDLDAASKIIAGTARSMGITVE 143
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_CYAA5 (50S ribosomal protein L11 OS=Cyanothece sp. (strain ATCC 51142) GN=rplK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 G+EKGS P QKVG I+ +QL+ IA K+PDLN I++AM I+ GTA NMG+ I+ Sbjct: 84 GIEKGSAQPNNQKVGSISRDQLKEIAQTKMPDLNANDIDAAMNIVEGTARNMGVTIN 140
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_CLOTE (50S ribosomal protein L11 OS=Clostridium tetani GN=rplK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 3 Query: 21 IGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 +G+E GS P + KV KIT EQL+ IA K+PDLN S+E+AMR++AGTA +MG+ ++ Sbjct: 83 VGIESGSGVPNKTKVAKITKEQLKEIAEMKMPDLNAGSVEAAMRMVAGTARSMGVTVE 140
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_SYNSC (50S ribosomal protein L11 OS=Synechococcus sp. (strain CC9605) GN=rplK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 3 Query: 27 VEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 ++KGS + + VG I+ QL IA KLPDLNCTSIESAMRII GTA NMG+ I Sbjct: 85 IQKGSGESAKGSVGSISRAQLEEIAKTKLPDLNCTSIESAMRIIEGTARNMGVSI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_PROMS (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain AS9601) GN=rplK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS + + VG I+ QL IA KLPDLNC+S+ESAM++I GTA NMG+ I Sbjct: 84 GIEKGSGESAKGSVGNISKAQLEEIAKTKLPDLNCSSVESAMKVIEGTARNMGVSI 139 The following BLAST results are available for this feature:
BLAST of FC872655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872655 ID=FC872655; Name=FC872655; organism=Citrus clementina; type=EST; length=774bpback to top |