FC872655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_PROM2 (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS + + VG I+ QL IA KLPDLNC+S+ESAM++I GTA NMG+ I Sbjct: 84 GIEKGSGESAKGSVGNISKAQLEEIAKTKLPDLNCSSVESAMKVIEGTARNMGVSI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_PROM0 (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+EKGS + + VG I+ QL IA KLPDLNC+S+ESAM++I GTA NMG+ I Sbjct: 84 GIEKGSGESAKGSVGNISKAQLEEIAKTKLPDLNCSSVESAMKVIEGTARNMGVSI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_PRB01 (50S ribosomal protein L11 OS=Gamma-proteobacterium EBAC31A08 GN=rplK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 3 Query: 18 IIGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 I+G+ KGS +P ++KVGK+T QL IA +K PDLN I++A+ IIAGTA +MG+++D Sbjct: 83 ILGIAKGSGEPNREKVGKLTRAQLEDIAKQKEPDLNSNDIDAAVLIIAGTARSMGVEVD 141
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_GEOSM (50S ribosomal protein L11 OS=Geobacter sp. (strain M21) GN=rplK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 3 Query: 21 IGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 +G++ GS P + KVGK+T +Q+R IAT+K+PDLN S+E+AM+ I GTA +MG++I Sbjct: 83 LGLQSGSAVPNKTKVGKLTKDQVREIATKKMPDLNAASLEAAMKTIEGTARSMGVEI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_GEOBB (50S ribosomal protein L11 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=rplK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 3 Query: 21 IGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 +G++ GS P + KVGK+T +Q+R IAT+K+PDLN S+E+AM+ I GTA +MG++I Sbjct: 83 LGLQSGSAVPNKTKVGKLTKDQVREIATKKMPDLNAASLEAAMKTIEGTARSMGVEI 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_GEMAT (50S ribosomal protein L11 OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=rplK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 3 Query: 21 IGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 +GVE+GS P + KVG IT QL IAT K+PDLNC S+ESA+ +IAG A +MGI + Sbjct: 82 LGVERGSGQPNKVKVGTITRAQLEKIATTKMPDLNCESMESAVAMIAGAARSMGITV 138
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_CLOAB (50S ribosomal protein L11 OS=Clostridium acetobutylicum GN=rplK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 191 G+E GS P + KVGKIT EQ++ IA K+PDLN S+E+AM +IAGTA +MG+++ Sbjct: 84 GIESGSGVPNKNKVGKITKEQVKEIAQTKMPDLNAASLEAAMSMIAGTARSMGVEV 139
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_STRVN (50S ribosomal protein L11 OS=Streptomyces violaceoruber GN=rplK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 GVEKGS +P + KV KIT +Q+R IAT K+PDLN ++ A +IIAGTA +MG+ ++ Sbjct: 87 GVEKGSGEPHKTKVAKITRDQVREIATTKMPDLNANDLDQAEKIIAGTARSMGVTVE 143
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_STRLI (50S ribosomal protein L11 OS=Streptomyces lividans GN=rplK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 GVEKGS +P + KV KIT +Q+R IAT K+PDLN ++ A +IIAGTA +MG+ ++ Sbjct: 87 GVEKGSGEPHKTKVAKITRDQVREIATTKMPDLNANDLDQAEKIIAGTARSMGVTVE 143
BLAST of FC872655 vs. ExPASy Swiss-Prot
Match: RL11_STRCO (50S ribosomal protein L11 OS=Streptomyces coelicolor GN=rplK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 24 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 194 GVEKGS +P + KV KIT +Q+R IAT K+PDLN ++ A +IIAGTA +MG+ ++ Sbjct: 87 GVEKGSGEPHKTKVAKITRDQVREIATTKMPDLNANDLDQAEKIIAGTARSMGVTVE 143 The following BLAST results are available for this feature:
BLAST of FC872655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872655 ID=FC872655; Name=FC872655; organism=Citrus clementina; type=EST; length=774bpback to top |