FC872663

Overview
NameFC872663
Unique NameFC872663
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length529
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGVV 515
            ++L+ING + +         VNP   E +  + AA A+DV+ AV AA+Q         W++ +   R++ LR     + +R  ELA +ET D GKPL E    DI   A   EYYA L   L+ +Q   + L    F     +EP+GVV
Sbjct:    7 QKLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG-----QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQ---IPLRGSAFVY-TRREPLGVV 146          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_YERPB (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGVV 515
            ++L+ING + +         VNP   E +  + AA A+DV+ AV AA+Q         W++ +   R++ LR     + +R  ELA +ET D GKPL E    DI   A   EYYA L   L+ +Q   + L    F     +EP+GVV
Sbjct:    7 QKLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG-----QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQ---IPLRGSAFVY-TRREPLGVV 146          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_YERPA (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGVV 515
            ++L+ING + +         VNP   E +  + AA A+DV+ AV AA+Q         W++ +   R++ LR     + +R  ELA +ET D GKPL E    DI   A   EYYA L   L+ +Q   + L    F     +EP+GVV
Sbjct:    7 QKLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG-----QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQ---IPLRGSAFVY-TRREPLGVV 146          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_YERP3 (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGVV 515
            ++L+ING + +         VNP   E +  + AA A+DV+ AV AA+Q         W++ +   R++ LR     + +R  ELA +ET D GKPL E    DI   A   EYYA L   L+ +Q   + L    F     +EP+GVV
Sbjct:    7 QKLYINGAYTDSASGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG-----QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQ---IPLRGSAFVY-TRREPLGVV 146          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_MARMS (Betaine aldehyde dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 47/148 (31.76%), Postives = 74/148 (50.00%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGV 512
            +Q +I+G +      +    +NP T E++  +  A   +++ AV++A+Q       K WS+ S   R + L+  A  + E   ELA LE +D GKPL+EA V DI   A   EYYA L + +    +    L   NF     +EP+G+
Sbjct:    4 QQQYIHGRYHASTSGEHFETINPATGEVIATVEHAGQAELDAAVESAKQGQ-----KVWSAMSPVERGRILKKAAELLRENNEELARLEVLDTGKPLQEAIVVDIQTGADVIEYYAGLTDKIQGDYQ---DLGNGNFFY-TRREPLGI 142          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_BURXL (Betaine aldehyde dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 48/148 (32.43%), Postives = 78/148 (52.70%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGV 512
            ++L+I G + +    +    ++P T E +  +  A+A DVE AV +AR+       ++W++ +   R++ LR     + ER  ELA LET D GKP+ E +  DI   A   EYYA LA  ++ +Q   + L   +F     +EP+GV
Sbjct:    7 QRLYIGGAYVDATSGETFDTLDPATGETLASVQQASAADVERAVQSAREGQ-----REWAALTAMQRSRVLRRAVEILRERNDELAALETRDTGKPIAETLAVDIATGADVIEYYAGLATAIEGQQ---IPLRPTSFVY-TRREPLGV 145          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGV 512
            ++L+I G + +    K     +P T E++  +  A+A DV+ AV +A+Q       ++W++ +   R++ LR     + ER  ELA +ET D GKP+ E +  DI   A   EYYA LA  ++  Q   V L  E+F     +EP+GV
Sbjct:    7 QRLYIGGAYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQQGQ-----REWAALTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQ---VPLRAESFVY-TRREPLGV 145          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGV 512
            ++L+I G + +    K     +P T E++  +  A+A DV+ AV +AR+       ++W++ +   R++ LR     + ER  ELA +ET D GKP+ E +  DI   A   EYYA LA  ++  Q   V L  E+F     +EP+GV
Sbjct:    7 QRLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQ-----REWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQ---VPLRAESFVY-TRREPLGV 145          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = 3
Query:   72 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGV 512
            ++L+I G + +    K     +P T E++  +  A+A DV+ AV +AR+       ++W++ +   R++ LR     + ER  ELA +ET D GKP+ E +  DI   A   EYYA LA  ++  Q   V L  E+F     +EP+GV
Sbjct:    7 QRLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQ-----REWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQ---VPLRAESFVY-TRREPLGV 145          
BLAST of FC872663 vs. ExPASy Swiss-Prot
Match: ALDA_STAES (Putative aldehyde dehydrogenase aldA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=aldA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 48/150 (32.00%), Postives = 74/150 (49.33%), Query Frame = 3
Query:   78 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNRGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKS*VLKEPIGVVGLI 524
            LFIN E++     + + + NP   E +  +  A  +DV+ AV AA  A        WS  S   RA YL  I+ +I E+   LA +E++  GKP  E +  D+   A  F+Y+A +        +  V+   +N  S V+ EP+GVVG +
Sbjct:   16 LFINNEFQASDSGETLTVSNPANGEDLAKVARAGKKDVDKAVQAAHDAFD-----SWSKISKEERADYLLEISRRIHEKTEHLATVESLQNGKPYRETSTIDVPQAANQFKYFASVL----TTDEGSVNEIDQNTMSLVVNEPVGVVGAV 156          
The following BLAST results are available for this feature:
BLAST of FC872663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
BETB_YERPE5.579e-1234.23Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPB5.579e-1234.23Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPA5.579e-1234.23Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERP35.579e-1234.23Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_MARMS5.579e-1231.76Betaine aldehyde dehydrogenase OS=Marinomonas sp. ... [more]
BETB_BURXL5.579e-1232.43Betaine aldehyde dehydrogenase OS=Burkholderia xen... [more]
BETB_BURVG5.579e-1233.11Betaine aldehyde dehydrogenase OS=Burkholderia vie... [more]
BETB_BURCM5.579e-1233.11Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURA45.579e-1233.11Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
ALDA_STAES5.579e-1232.00Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG07ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3BG07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872663 ID=FC872663; Name=FC872663; organism=Citrus clementina; type=EST; length=529bp
GGGGAAAAAAAAATAAAAGTAAAAAAACCGAGAGAAAAGGAAAAATGGCG
ATGGCGATCCCAATCCCAAGTCGTCAGCTGTTCATCAACGGTGAATGGAG
AGAGCCCGTTCTCAAGAAACGCATCCCAATCGTTAATCCCACCACTGAAG
AGATCGTCGGTGATATTCCAGCAGCTACCGCTGAAGATGTTGAGCTGGCT
GTGGATGCCGCCCGTCAAGCACTTTCTAGAAACAGAGGGAAGGATTGGTC
CTCTGCATCCGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTA
AGATAACAGAGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGT
GGGAAGCCACTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTG
TTTCGAGTACTATGCAGACCTTGCTGAAGGCTTAGATGCCAAACAAAAGG
CTCCTGTTTCTCTTCCTATGGAGAATTTCAAGAGTTAAGTACTTAAGGAA
CCCATTGGGGTTGTTGGATTGATTACTCC
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