FC872686

Overview
NameFC872686
Unique NameFC872686
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872686 vs. ExPASy Swiss-Prot
Match: SUT35_ARATH (Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.321e-13
Identity = 41/134 (30.60%), Postives = 80/134 (59.70%), Query Frame = 3
Query:   18 QQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLK 419
            +QYP +    G +I+++ +P++FAN +++++R+  +  D         E E I F++L+++ V+ ID + ++ L ++ +   S++I++ I NP  EVL  +  S  V+ IGKE+ F+   DAVQ C  ++ + K
Sbjct:  507 EQYPASEEMLGYIILQLGSPVFFANSTYVRERILRWIRD---------EPEAIEFLLLDLSGVSTIDMTGMETLLEIQRILGSKNIKMVIINPRFEVLEKMMLSHFVEKIGKEYMFLSIDDAVQACRFNLTTTK 631          
BLAST of FC872686 vs. ExPASy Swiss-Prot
Match: SUT22_ARATH (Sulfate transporter 2.2 OS=Arabidopsis thaliana GN=SULTR2;2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.700e-11
Identity = 41/131 (31.30%), Postives = 77/131 (58.78%), Query Frame = 3
Query:    9 GNTQQYPEAYTYHGIVIVRIDAPIY-FANISFLKDRLRE--YEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQV 392
            G+  QYP A    G++ +RI +P+  FAN +F++DR+     E++ + + +   +   +  VIL+M+ V  +D+S V AL++L+QE  S DI++ I++P   VL  L ++ + + I  E  ++   +AV +
Sbjct:  516 GDINQYPMANKTAGLLTLRISSPLLCFANANFIRDRILNSVQEIEGEENEQEVLKENGLQVVILDMSCVMGVDTSGVFALEELHQELASNDIRLVIASPRWRVLHKLKRAKLDEKIKTENIYMTVGEAVDI 646          
The following BLAST results are available for this feature:
BLAST of FC872686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SUT35_ARATH1.321e-1330.60Probable sulfate transporter 3.5 OS=Arabidopsis th... [more]
SUT22_ARATH4.700e-1131.30Sulfate transporter 2.2 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1DA11ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1DA11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872686 ID=FC872686; Name=FC872686; organism=Citrus clementina; type=EST; length=797bp
CGGGCCGGGGAAACACTCAGCAATACCCAGAAGCATATACTTACCACGGA
ATAGTAATTGTTCGCATAGATGCACCTATCTACTTTGCAAATATAAGTTT
CCTAAAAGACAGGCTACGGGAATATGAAGTTGATGTTGATAGATCTACAA
GGCGTGGACCGGAAGTTGAAAGAATTTACTTTGTGATCTTAGAGATGGCA
CCTGTTACCTATATCGATTCTAGTGCTGTTCAGGCCTTGAAAGACTTGTA
TCAAGAATACAAATCAAGGGACATTCAGATTGCCATTTCCAATCCGAATC
ATGAGGTTCTCCTGACTTTGTCCAAATCGGGTGTTGTTGATCTGATTGGC
AAGGAGTGGTACTTTGTGAGAGCCCATGATGCCGTTCAAGTTTGCCTCCA
GCATGTACAGAGCTTGAAAGAAACTGCTAATGCACCTTATCCTTTACCTG
ATGACAAACTAAGTTTTCTCCAGAGATTACTCAAATCTCGTGGGGAAGAT
TTATCAATTGCTGAGCTAGAGTCGGGTGCTCAAAGGCCTCCAGATTTCAA
GGACACGGACCCTAAGTTGGAGCCCCTACTATATCGCAAGTCGTGAATTT
GCATTCTTGCTTCTCCCTCAAACATAAAATGATGCCAATTTTTAGCAAGG
CATGTAAATGTCTTTTGTCCGGCTGCAGCCATTAAAATTTGATTGTTTCT
TGTAGTTAGTCTCCCTTAAGTGTAAAATGTAATGCCATATGCTGCAAATA
TAGACTTCGATTTCTTGTAAGAAAAAAAAAAAAAAAAAAAAAAAAAA
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