FC872689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_ZYMMO (ATP synthase gamma chain OS=Zymomonas mobilis GN=atpG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.318e-24 Identity = 60/154 (38.96%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 140 QKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 + +P+ + +A D+++ EFD + +S +HSV+S +PT ++ + ++ + S IE + IL L + ++ A+LENA SEQG+RMSAM++S+RNAGEM+ +L++ YNR RQA+ITTEL+EIISGA AL Sbjct: 145 ETSPVTFENAQKIAQDLIQRFNAGEFDVAHLFFSHYHSVLSQVPTETQIIPAAPEGDDTKNQAAANDASSGAIEFEPDEETILSTLLPRSIAVAIYQAMLENATSEQGSRMSAMENSTRNAGEMISKLSIQYNRLRQAAITTELVEIISGAEAL 298
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHOSK (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=atpG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.318e-24 Identity = 74/185 (40.00%), Postives = 109/185 (58.92%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K + L RD + + + + Y +A D+L EFD I +++F SV+S +PT V+ P + E E G++ L YE ++ +L +L + +F A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL Sbjct: 114 KTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGEFDVATIFFARFQSVISQVPTAQQVI-PAVFEGE----GEVSSLYDYE----PSEEGVLADLLPRGVATQIFTALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS1 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.318e-24 Identity = 74/185 (40.00%), Postives = 109/185 (58.92%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K + L RD + + + + Y +A D+L EFD I +++F SV+S +PT V+ P + E E G++ L YE ++ +L +L + +F A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL Sbjct: 114 KTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGEFDVATIFFARFQSVISQVPTAQQVI-PAVFEGE----GEVSSLYDYE----PSEEGVLADLLPRGVATQIFTALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_SPHWW (ATP synthase gamma chain OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpG PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.954e-24 Identity = 71/186 (38.17%), Postives = 110/186 (59.14%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKL-GELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K+ ++G+K +A+L R I + + + ++ ++A+D++ EFD + ++KF S + PT ++ L A++G G + E E E IL L + +F A+LENA SEQG+RM+AMD+++RNAGEM+++LT+ YNRTRQA+ITTELIEII+GA AL Sbjct: 114 KTVKFYLIGKKGRAVLQRLFPGKIVHQVDQSHIKNVAFSDAHMVAEDLIGRYSAGEFDVAHLFFAKFQSALVQEPTELQIIPVPLT---ADTGAAATGASAAVEYEPDEEA--ILTELLPRNVAVQLFRAMLENAASEQGSRMTAMDNATRNAGEMINKLTIQYNRTRQAAITTELIEIIAGAEAL 294
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS4 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.164e-24 Identity = 73/185 (39.46%), Postives = 109/185 (58.92%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K + L RD + + + + Y +A D+L EFD I +++F SV++ +PT V+ P + E E G++ L YE ++ +L +L + +F A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL Sbjct: 114 KTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGEFDVATIFFARFQSVINQVPTAQQVI-PAVFEGE----GEVSSLYDYE----PSEEGVLADLLPRGVATQIFTALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_BEII9 (ATP synthase gamma chain OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=atpG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.164e-24 Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K+ K + +G+K +L R + I +I + + + IL K+ EFD + ++KF +V+ +PT A L P V+ + ++ L YE ++ +IL L + + A+LENA SEQGARMSAMD++SRNAGEM+ + TL YNR+RQA IT ELIEIISGA AL Sbjct: 114 KKVKILCVGKKGYDLLKRQFGEQILELIELRSVRTIGFVNAEAIGRKILNLYKDAEFDVCTLFFAKFRTVLHQIPT-AQQLIPLAVKTQEDAPAAPPSLYEYE----PSEEQILATLLPRNITIQVLRALLENAASEQGARMSAMDNASRNAGEMIKKQTLKYNRSRQAMITKELIEIISGAEAL 293
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPB (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain BisB18) GN=atpG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.744e-24 Identity = 79/196 (40.31%), Postives = 107/196 (54.59%), Query Frame = 2 Query: 14 KSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 ++L +N G KE K +G K L R + I I L + +A ++ N EFD + YS+F SV+S +PT ++ P +VE A + G SYE E E EIL L + +F A+LEN S GA+MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA A+ Sbjct: 105 RALSLMNQG--KEVKLFCVGRKGYEQLRRTFDRQIVENIELRSVRQLGFVNAEDIAHKVVARFNNGEFDVCTLFYSRFKSVISQIPTAQQII-PLVVEAPAANAGPA---TSYEYEPEED--EILAGLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEIISGAEAI 292
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCS (ATP synthase gamma chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpG PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.808e-24 Identity = 72/191 (37.70%), Postives = 110/191 (57.59%), Query Frame = 2 Query: 35 SGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVL--SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 +G + K + +G K + +L R+ I ++ + L++ + +L+ E FD +IY+KF S ++ + T V+ +P + AE+ YE E E K IL L + +++A+LE+A SEQGARM+AMD+++RNAG+M+ +LTL YNRTRQASIT ELIEIISGA A+ Sbjct: 110 TGEGRTVKLLCVGRKGRDLLRREYAGMIVHSFEDVGRRRLSFADADRITAKVLELFEAGEFDVATVIYNKFRSAITQVVTAQQVIPFAPAVATEPAETAEAK---PLYEFEPNEEK--ILAELLPRNLAVQVYSALLESAASEQGARMTAMDNATRNAGDMIKKLTLVYNRTRQASITKELIEIISGAEAV 295
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_SINMW (ATP synthase gamma chain OS=Sinorhizobium medicae (strain WSM419) GN=atpG PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.150e-23 Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 2 Query: 47 KENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 K K + +G+K IL R+ I + + E++K N ++ ++ N EFD + YS+F SV+S +PT ++ E AE + E YE + IL +L S +F A+LEN E GA+MSAMD+++RNAGEM+++LTL YNR RQA IT ELIEIISGA AL Sbjct: 114 KTVKIICVGKKGFDILRREFASLIIDRVDLREVKKIGFENADRIGHKVIELFDNGEFDVCTLFYSEFKSVISQIPTAQQLIPASAGEAVAEGASAIYE---YEPDAAA----ILSDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLNYNRQRQAQITKELIEIISGAEAL 291
BLAST of FC872689 vs. ExPASy Swiss-Prot
Match: ATPG_NITWN (ATP synthase gamma chain OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=atpG PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.150e-23 Identity = 79/191 (41.36%), Postives = 104/191 (54.45%), Query Frame = 2 Query: 29 LNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 592 +N G KE K+ +G K L R +K I + L + +A +L EFD + YS+F SV++ +PT V+ P VE A S G SYE E E EIL L + +F A+LEN S GA+M+AMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+ Sbjct: 110 MNQG--KEVKFFCVGRKGYEQLRRIFEKQIVETVELRTVRQLGFVNAEDIARKVLARFDAGEFDVCTLFYSRFQSVIAQVPTAQQVI-PLAVEDAARSDGPA---PSYEYEPEED--EILNGLLPRNLAVQIFRALLENNASFYGAQMTAMDNATRNAGEMIRKQTLIYNRTRQAMITKELIEIISGAEAV 292 The following BLAST results are available for this feature:
BLAST of FC872689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872689 ID=FC872689; Name=FC872689; organism=Citrus clementina; type=EST; length=827bpback to top |